RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 COG1Q8WTW3 980 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 RABGGTAQ92696 567 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 PCED1BQ96HM7 432 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 FUBP3Q96I24 572 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 C11orf84Q9BUA3 381 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 TRIM7Q9C029 511 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 ZCWPW1Q9H0M4 648 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 GOLPH3Q9H4A6 298 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CHST7Q9NS84 486 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 FAM49BQ9NUQ9 324 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 ASNSD1Q9NWL6 643 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 HESX1Q9UBX0 185 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 TJP2Q9UDY2 1190 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 CHORDC1Q9UHD1 332 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 IP6K2Q9UHH9 426 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 ANAPC7Q9UJX3 599 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 FAN1Q9Y2M0 1017 aa6.97□□□□□ -1.29
ATG4A-207ENST00000474825 TIMM13Q9Y5L4 95 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-207ENST00000474825 COL4A4P53420 1690 aaPredicted RBP6.96□□□□□ -1.29
ATG4A-207ENST00000474825 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 A0A1W2PPC1 479 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 OR6C75A6NL08 312 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TBKBP1A7MCY6 615 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 EFCAB8A8MWE9 144 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 E5RJQ4 531 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 I3L4J1 428 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 PDE2AO00408 941 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 PSTPIP1O43586 416 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 NCK2O43639 380 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TLL1O43897 1013 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 SRGAP2O75044 1071 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TADA2AO75478 443 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 BEST1O76090 585 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 AMHP03971 560 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 GLI1P08151 1106 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 LINC00271P0C7V0 271 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 KRT3P12035 628 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 ACAT1P24752 427 aaKnown RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 MAGEA11P43364 429 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF143P52747 638 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 BCAR1P56945 870 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 PSMC1P62191 440 aaKnown RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 SLC6A3Q01959 620 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 RNASELQ05823 741 aaKnown RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 ADCY1Q08828 1119 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 PPIGQ13427 754 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 MESDQ14696 234 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TAZQ16635 292 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 CFAP221Q4G0U5 840 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 MDH1BQ5I0G3 518 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 RASIP1Q5U651 963 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 DCAF12L1Q5VU92 463 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 PM20D1Q6GTS8 502 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 FUT10Q6P4F1 479 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 BEND5Q7L4P6 421 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 POLNQ7Z5Q5 900 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 FAM35AQ86V20 835 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 PIGZQ86VD9 579 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 ARFGAP1Q8N6T3 406 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 IPO4Q8TEX9 1081 aaKnown RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 BCL7CQ8WUZ0 217 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 CENPIQ92674 756 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 ALG3Q92685 438 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 NT5C3BQ969T7 300 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 BTBD6Q96KE9 485 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 FAM193BQ96PV7 902 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 SMOQ99835 787 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 NCAPGQ9BPX3 1015 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 CARD6Q9BX69 1037 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 GPR62Q9BZJ7 368 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM30AQ9NV96 361 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TMLHEQ9NVH6 421 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 IL37Q9NZH6 218 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 BACE2Q9Y5Z0 518 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 USP3Q9Y6I4 520 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 SCN5AQ14524 2016 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 MICAL3Q7RTP6 2002 aa6.96□□□□□ -1.3
ATG4A-207ENST00000474825 SF3B1O75533 1304 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATG4A-207ENST00000474825 TSC2P49815 1807 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 FAM92AA1XBS5 289 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CLDN5O00501 218 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 KCNK3O14649 394 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF185O15231 689 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 ENDOD1O94919 500 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 FBXO21O94952 628 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 S1PR4O95977 384 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 FGBP02675 491 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 FAM200BP0CF97 657 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 ADORA2BP29275 332 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PTPN7P35236 360 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PCK1P35558 622 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PTPN9P43378 593 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CACNA2D1P54289 1103 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SLC8A3P57103 927 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 DEFB103AP81534 67 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 TSPY1Q01534 308 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms