RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SERPINC1P01008 464 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 POU2F2P09086 479 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 PAEPP09466 180 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 C1QTNF9P0C862 333 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 HMGA1P17096 107 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 HOXB8P17481 243 aaPredicted RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TGM1P22735 817 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 BRD2P25440 801 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 PMLP29590 882 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 HOXA9P31269 272 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CCR2P41597 374 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 PGFP49763 221 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 USP46P62068 366 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 NTHL1P78549 312 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CYP27A1Q02318 531 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 RING1Q06587 406 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TWF1Q12792 350 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 SMARCB1Q12824 385 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 DDR2Q16832 855 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 RARS2Q5T160 578 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 ARHGAP17Q68EM7 881 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 ZC3H14Q6PJT7 736 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CLEC20AQ6ZU45 233 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 GPRIN1Q7Z2K8 1008 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 GPR149Q86SP6 731 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TMEM150AQ86TG1 271 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 FAM35AQ86V20 835 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 SLC47A2Q86VL8 602 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TTC30AQ86WT1 665 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TMC8Q8IU68 726 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 SIX5Q8N196 739 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TTC39CQ8N584 583 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 SPPL2BQ8TCT7 592 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 C2orf15Q8WU43 125 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 DDX1Q92499 740 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CYFIP2Q96F07 1278 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 FUBP3Q96I24 572 aaKnown RBP eCLIP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 HEXIM2Q96MH2 286 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 SEPT5Q99719 369 aaPredicted RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 STK33Q9BYT3 514 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 PRKD2Q9BZL6 878 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 ADAM7Q9H2U9 754 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 IL21Q9HBE4 155 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 CSNK1G1Q9HCP0 422 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF334Q9HCZ1 680 aaPredicted RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 NLRC4Q9NPP4 1024 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 KRT82Q9NSB4 513 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 ZDHHC7Q9NXF8 308 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 DNMT3BQ9UBC3 853 aaKnown RBP7.41□□□□□ -1.22
LIMD1-204ENST00000474665 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 NR2E1Q9Y466 385 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 MAST4O15021 2626 aa7.41□□□□□ -1.22
LIMD1-204ENST00000474665 MYOFQ9NZM1 2061 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 TNFRSF10BO14763 440 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 TADA3O75528 432 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 HNRNPA1P09651 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 KRT5P13647 590 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 CHRNB2P17787 502 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 ADORA2BP29275 332 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 EPHA5P54756 1037 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 MFAP3P55082 362 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 YWHAEP62258 255 aaKnown RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 RAPGEF1Q13905 1077 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 MAPRE1Q15691 268 aaKnown RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 CNGA2Q16280 664 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SLC5A9Q2M3M2 681 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 MGAT5BQ3V5L5 792 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 PPM1LQ5SGD2 360 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 N4BP2L1Q5TBK1 243 aaPredicted RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 LIN9Q5TKA1 542 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 LCLAT1Q6UWP7 414 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 VSTM1Q6UX27 236 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 CCDC149Q6ZUS6 474 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 GAREM2Q75VX8 874 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 RTL10Q7L3V2 364 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 IRF2BP2Q7Z5L9 587 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 DNAJB7Q7Z6W7 309 aaPredicted RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 NOP9Q86U38 636 aaKnown RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 LURAP1LQ8IV03 231 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 VSTM4Q8IW00 320 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 HS6ST3Q8IZP7 471 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 WDTC1Q8N5D0 677 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SLC20A1Q8WUM9 679 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF606Q8WXB4 792 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SMG7Q92540 1137 aaKnown RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 TCEAL4Q96EI5 215 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 C8orf48Q96LL4 319 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SYT11Q9BT88 431 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 DUSP16Q9BY84 665 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 POMKQ9H5K3 350 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 IL37Q9NZH6 218 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms