RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GLIS3Q8NEA6 775 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 WHAMMQ8TF30 809 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 LRRC15Q8TF66 581 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 RLN3Q8WXF3 142 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 SPACA7Q96KW9 195 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF560Q96MR9 790 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 PLIN2Q99541 437 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 LLPHQ9BRT6 129 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 PARVGQ9HBI0 331 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 FSCN3Q9NQT6 498 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 MBD1Q9UIS9 605 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 PILRBQ9UKJ0 227 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 L1RE1Q9UN81 338 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ARHGAP26Q9UNA1 814 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 GPSM3Q9Y4H4 160 aa5.51□□□□□ -1.53
SNRNP40-204ENST00000474025 ATXN2Q99700 1313 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ANAPC1Q9H1A4 1944 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 PLXND1Q9Y4D7 1925 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ASXL3Q9C0F0 2248 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 PCDH15Q96QU1 1955 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 VWA3AA6NCI4 1184 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 SGK1O00141 431 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 TRAK2O60296 914 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ADAM23O75077 832 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM13AO94988 1023 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 IL18RAPO95256 599 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 KLF8O95600 359 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 HDCP19113 662 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ITPKAP23677 461 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ACAT1P24752 427 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ADSSP30520 456 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 PNPLA4P41247 253 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 DPP6P42658 865 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 MAGEA11P43364 429 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 KIR2DL1P43626 348 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 WNT7BP56706 349 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 GTF2BQ00403 316 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 POU5F1Q01860 360 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 HNRNPDQ14103 355 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 KCNB1Q14721 858 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF423Q2M1K9 1284 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 CFAP221Q4G0U5 840 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 HSF5Q4G112 596 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 SOWAHCQ53LP3 525 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 SPDYCQ5MJ68 293 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 LYSMD4Q5XG99 296 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 LMBRD2Q68DH5 695 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ADALQ6DHV7 355 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 CRELD2Q6UXH1 353 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 OSTM1Q86WC4 334 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 GPBP1Q86WP2 473 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 C12orf40Q86WS4 652 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 TTC30AQ86WT1 665 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 CHCHD4Q8N4Q1 142 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 MYCT1Q8N699 235 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 FRMD1Q8N878 549 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 C1orf127Q8N9H9 656 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 FSIP1Q8NA03 581 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM184AQ8NB25 1140 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 CXorf38Q8TB03 319 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 SPATA18Q8TC71 538 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 FUBP3Q96I24 572 aaKnown RBP eCLIP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 CDK5RAP3Q96JB5 506 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ACBD6Q9BR61 282 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 IKZF4Q9H2S9 585 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 CAPN10Q9HC96 672 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 BLOC1S4Q9NUP1 217 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 DDX43Q9NXZ2 648 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 GTF3C4Q9UKN8 822 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 AGO2Q9UKV8 859 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 LIMCH1Q9UPQ0 1083 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 STYXL1Q9Y6J8 313 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF462Q96JM2 2506 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 HELZP42694 1942 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 TCHHQ07283 1943 aa5.5□□□□□ -1.53
SNRNP40-204ENST00000474025 ADAMTS20P59510 1910 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 A0A0A0MRY4 1105 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 TCRBV21S2A2A0A5A6 115 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 RNF223E7ERA6 249 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 LEFTY2O00292 366 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 LCE2BO14633 110 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 GABRDO14764 452 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SCAMP3O14828 347 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC26A4O43511 780 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 HCRTO43612 131 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 OPHN1O60890 802 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 HUS1O60921 280 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 KAT7O95251 611 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ITGB3P05106 788 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 CFIP05156 583 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SERPINF2P08697 491 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 CD59P13987 128 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 PFKLP17858 780 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 PCSK1P29120 753 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ABCD1P33897 745 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 EIF2DP41214 584 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC6A11P48066 632 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 PDE6CP51160 858 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ATXN3P54252 364 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms