RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TMX4Q9H1E5 349 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 RIC8AQ9NPQ8 531 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 RASSF1Q9NS23 344 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 MAP3K20Q9NYL2 800 aaKnown RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SRP68Q9UHB9 627 aaKnown RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 EIF2B4Q9UI10 523 aaKnown RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ZFR2Q9UPR6 939 aaKnown RBP4.87□□□□□ -1.63
BRCA1-212ENST00000473961 SCINQ9Y6U3 715 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 ITIH6Q6UXX5 1313 aa4.87□□□□□ -1.63
BRCA1-212ENST00000473961 A0A0B4J269 797 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 A0A1B0GTW7 788 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 OR2W5A6NFC9 320 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 DCLK1O15075 740 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 CD3EAPO15446 510 aaKnown RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 ZSCAN9O15535 394 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 FAM155BO75949 473 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 MBD4O95243 580 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 SRGNP10124 158 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 KCNA3P22001 575 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 EPHA3P29320 983 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 ELF1P32519 619 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 GDF5P43026 501 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 MAN2A2P49641 1150 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 NDUFV1P49821 464 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 ACTR2P61160 394 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 RPS7P62081 194 aaKnown RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 SCAPQ12770 1279 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 MYO1EQ12965 1108 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 TRPC3Q13507 836 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 CSHL1Q14406 222 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 RPS6KA2Q15349 733 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 HS1BP3Q53T59 392 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 L1TD1Q5T7N2 865 aaKnown RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 MANEALQ5VSG8 457 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 ICE2Q659A1 982 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 LIN54Q6MZP7 749 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 RETSATQ6NUM9 610 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 RINT1Q6NUQ1 792 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 TMEM108Q6UXF1 575 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 CIR1Q86X95 450 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 OR56A1Q8NGH5 318 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 MBD3L2Q8NHZ7 208 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 AFG1LQ8WV93 481 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 SNX19Q92543 992 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 DDX23Q9BUQ8 820 aaKnown RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 MEGF9Q9H1U4 602 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 PABPC3Q9H361 631 aaKnown RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 TAF1DQ9H5J8 278 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 NOD2Q9HC29 1040 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 PRDM8Q9NQV8 689 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 NDUFAF4Q9P032 175 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 KCNE5Q9UJ90 142 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 C19orf53Q9UNZ5 99 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 TBC1D30Q9Y2I9 924 aa4.86□□□□□ -1.63
BRCA1-212ENST00000473961 USP15Q9Y4E8 981 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-212ENST00000473961 PRAMEF33A0A0G2JMD5 474 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 PNMA6EA0A0J9YXQ4 647 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 A0A1W2PS29 197 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 MYADML2A6NDP7 307 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 F5H697 171 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 TRIM24O15164 1050 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 DNPH1O43598 174 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 PRAMEF10O60809 474 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 PRSS23O95084 383 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 ANXA6P08133 673 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 CD19P15391 556 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 RBL1P28749 1068 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 CD6P30203 668 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 AKT1P31749 480 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 ZEB1P37275 1124 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-212ENST00000473961 PDE6CP51160 858 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 PGDP52209 483 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 UBE3AQ05086 875 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 FPGSQ05932 587 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 FOXL1Q12952 345 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 PDE1CQ14123 709 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-212ENST00000473961 KCNAB1Q14722 419 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 FAM110CQ1W6H9 321 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 UBXN11Q5T124 520 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 FAM102AQ5T9C2 384 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-212ENST00000473961 ARHGAP40Q5TG30 622 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 GLB1LQ6UWU2 654 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 MICALCLQ6ZW33 695 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 HTR3DQ70Z44 454 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 MAPKAPK5Q8IW41 473 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 TMEM57Q8N5G2 664 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 ESX1Q8N693 406 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 TRAPPC9Q96Q05 1148 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 HIST1H2AAQ96QV6 131 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 OSBPL9Q96SU4 736 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 MNTQ99583 582 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 TTPALQ9BTX7 342 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 GPR87Q9BY21 358 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 INO80BQ9C086 356 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-212ENST00000473961 BRD8Q9H0E9 1235 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 SERHL2Q9H4I8 314 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 ELAC1Q9H777 363 aaKnown RBP4.85□□□□□ -1.63
BRCA1-212ENST00000473961 UNKLQ9H9P5 680 aaKnown RBP4.85□□□□□ -1.63
BRCA1-212ENST00000473961 JMJD4Q9H9V9 463 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 TMLHEQ9NVH6 421 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms