RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RNF135Q8IUD6 432 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 PDZD8Q8NEN9 1154 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 ST13P5Q8NFI4 369 aaPredicted RBP13.11□□□□□ -0.31
DDX56-209ENST00000473924 SCAMP5Q8TAC9 235 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 NAA15Q9BXJ9 866 aaKnown RBP13.11□□□□□ -0.31
DDX56-209ENST00000473924 COL25A1Q9BXS0 654 aaPredicted RBP13.11□□□□□ -0.31
DDX56-209ENST00000473924 TASP1Q9H6P5 420 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 TRPC7Q9HCX4 862 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 CD320Q9NPF0 282 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 ZMYM5Q9UJ78 669 aa13.11□□□□□ -0.31
DDX56-209ENST00000473924 GREB1Q4ZG55 1949 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 A0A1W2PQC6 194 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 F8VZ95 297 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 NRG2O14511 850 aaPredicted RBP13.1□□□□□ -0.31
DDX56-209ENST00000473924 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
DDX56-209ENST00000473924 EPHB6O15197 1021 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 ASGR2P07307 311 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 DDX6P26196 483 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX56-209ENST00000473924 KRT9P35527 623 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 NR1I3Q14994 352 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 TXNDC8Q6A555 127 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 TMEM150AQ86TG1 271 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 FAM71AQ8IYT1 594 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 MAB21L3Q8N8X9 362 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 ZSCAN18Q8TBC5 510 aaPredicted RBP13.1□□□□□ -0.31
DDX56-209ENST00000473924 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
DDX56-209ENST00000473924 ZSWIM3Q96MP5 696 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 ZSWIM1Q9BR11 485 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 KCNK12Q9HB15 430 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 ACP6Q9NPH0 428 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 IGSF9Q9P2J2 1179 aa13.1□□□□□ -0.31
DDX56-209ENST00000473924 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
DDX56-209ENST00000473924 DPYSL4O14531 572 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 TADA3O75528 432 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 GFPT2O94808 682 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 CLCN1P35523 988 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 AVPR1AP37288 418 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 STAT1P42224 750 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 PLA2G4AP47712 749 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 PDE6CP51160 858 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 PARM1Q6UWI2 310 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 CMTM8Q8IZV2 173 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 FGF14Q92915 247 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 SMARCD2Q92925 531 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 NXPE3Q969Y0 559 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 ASB16Q96NS5 453 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 ZFP14Q9HCL3 533 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 MUTYHQ9UIF7 546 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
DDX56-209ENST00000473924 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 TULP2O00295 520 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 CKMP06732 381 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 LCP1P13796 627 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 CYP11B1P15538 503 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 SOX5P35711 763 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 RGS7P49802 495 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 TKTL1P51854 596 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 KIF11P52732 1056 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 HTR4Q13639 388 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 MEA1Q16626 185 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 PKDCCQ504Y2 493 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 POTEHQ6S545 545 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 MON1AQ86VX9 555 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 GPIHBP1Q8IV16 184 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 ARID3BQ8IVW6 561 aaPredicted RBP13.08□□□□□ -0.32
DDX56-209ENST00000473924 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 TLR8Q9NR97 1041 aaKnown RBP13.08□□□□□ -0.32
DDX56-209ENST00000473924 ST7Q9NRC1 585 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 GMIPQ9P107 970 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 SORCS3Q9UPU3 1222 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 CEP83Q9Y592 693 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 PATJQ8NI35 1801 aa13.08□□□□□ -0.32
DDX56-209ENST00000473924 ZNF638Q14966 1978 aaKnown RBP13.07□□□□□ -0.32
DDX56-209ENST00000473924 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms