RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FGAP02671 866 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 CD63P08962 238 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 MYCLP1P12525 358 aaPredicted RBP2.6□□□□□ -1.99
CCDC39-203ENST00000473854 RHCEP18577 417 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 FPR3P25089 353 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 CPA2P48052 419 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 E2F1Q01094 437 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 STRN3Q13033 797 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 STIM1Q13586 685 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SF3B4Q15427 424 aaKnown RBP eCLIP2.6□□□□□ -1.99
CCDC39-203ENST00000473854 NADSYN1Q6IA69 706 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 HOMEZQ8IX15 550 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 PPM1NQ8N819 430 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 OSCP1Q8WVF1 389 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 JPH3Q8WXH2 748 aaPredicted RBP2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SLITRK1Q96PX8 696 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SLC2A13Q96QE2 648 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 ZSWIM4Q9H7M6 989 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SLAMF7Q9NQ25 335 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SNX15Q9NRS6 342 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 AGAP1Q9UPQ3 857 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SHOC2Q9UQ13 582 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 KIF26BQ2KJY2 2108 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 A0A087WYN8 130 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 NT5C1B-RDH14C9J2C7 533 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 M0R3H8 397 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 PSMD9O00233 223 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 PIM1P11309 404 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-203ENST00000473854 CPEP16870 476 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 TACR3P29371 465 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 SP2Q02086 613 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 LTBQ06643 244 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 AMOTQ4VCS5 1084 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 RANBP10Q6VN20 620 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 RFX8Q6ZV50 586 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 COL23A1Q86Y22 540 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-203ENST00000473854 RAB11FIP4Q86YS3 637 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 FAM46DQ8NEK8 389 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 NSUN6Q8TEA1 469 aaKnown RBP2.59□□□□□ -1.99
CCDC39-203ENST00000473854 MIB2Q96AX9 1013 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 DNAJC2Q99543 621 aaKnown RBP2.59□□□□□ -1.99
CCDC39-203ENST00000473854 SF3B5Q9BWJ5 86 aaKnown RBP2.59□□□□□ -1.99
CCDC39-203ENST00000473854 TTYH3Q9C0H2 523 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 MYLK2Q9H1R3 596 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 WDCPQ9H6R7 721 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 NDRG4Q9ULP0 352 aaKnown RBP2.59□□□□□ -1.99
CCDC39-203ENST00000473854 PCDHA7Q9UN72 937 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 POLHQ9Y253 713 aa2.59□□□□□ -1.99
CCDC39-203ENST00000473854 AP4M1O00189 453 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 ZC3H11AO75152 810 aaKnown RBP eCLIP2.58□□□□□ -2
CCDC39-203ENST00000473854 KRTAP5-8O75690 187 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 LRPAP1P30533 357 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 MLH1P40692 756 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 CXCR3P49682 368 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 FXR1P51114 621 aaKnown RBP eCLIP2.58□□□□□ -2
CCDC39-203ENST00000473854 DSC2Q02487 901 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 SNAPC2Q13487 334 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 BOP1Q14137 746 aaKnown RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 CYP1B1Q16678 543 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 CC2D1BQ5T0F9 858 aaKnown RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 DCDC5Q6ZRR9 648 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 CAND1Q86VP6 1230 aaKnown RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 CPA6Q8N4T0 437 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 HS6ST2Q96MM7 605 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 RBM38Q9H0Z9 239 aaKnown RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 PIF1Q9H611 641 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 PLSCR4Q9NRQ2 329 aa2.58□□□□□ -2
CCDC39-203ENST00000473854 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 GAR1Q9NY12 217 aaKnown RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 TTBK1Q5TCY1 1321 aaPredicted RBP2.58□□□□□ -2
CCDC39-203ENST00000473854 PRSS29PA6NIE9 313 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 TRIM75PA6NK02 468 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 CES2O00748 559 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 AKAP10O43572 662 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 NDUFS2O75306 463 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 FGF2P09038 288 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 TCEA1P23193 301 aaKnown RBP2.57□□□□□ -2
CCDC39-203ENST00000473854 PRDX5P30044 214 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 VIPR2P41587 438 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 LILRA4P59901 499 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 KCNB1Q14721 858 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 MRGPRG-AS1Q2M3A8 158 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 KHDC1Q4VXA5 237 aaKnown RBP2.57□□□□□ -2
CCDC39-203ENST00000473854 SLC39A5Q6ZMH5 540 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 TRAPPC11Q7Z392 1133 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 BCAS4Q8TDM0 211 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 ASB5Q8WWX0 329 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 NEUROG1Q92886 237 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 PRR25Q96S07 402 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 DMRTA2Q96SC8 542 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 VRK1Q99986 396 aaPredicted RBP2.57□□□□□ -2
CCDC39-203ENST00000473854 VTA1Q9NP79 307 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 IPPQ9Y573 584 aa2.57□□□□□ -2
CCDC39-203ENST00000473854 SCN5AQ14524 2016 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 DCLK1O15075 740 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 HTRA2O43464 458 aaPredicted RBP2.56□□□□□ -2
CCDC39-203ENST00000473854 ARRB2P32121 409 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 SOX5P35711 763 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 POLD2P49005 469 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 COPB1P53618 953 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms