RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 F11P03951 625 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 FERP16591 822 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 GABRR2P28476 465 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 KRT9P35527 623 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 CCR2P41597 374 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 GPD2P43304 727 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 PPP3CCP48454 512 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 USP46P62068 366 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 SPECC1LQ69YQ0 1117 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 GAREM2Q75VX8 874 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 OTOP3Q7RTS5 596 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 PIGZQ86VD9 579 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 VSTM4Q8IW00 320 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 PDZD8Q8NEN9 1154 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 UBA3Q8TBC4 463 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 EPS8L1Q8TE68 723 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 SLC35F5Q8WV83 523 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 KCTD13Q8WZ19 329 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 SECISBP2LQ93073 1101 aaKnown RBP20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 NUCKS1Q9H1E3 243 aaKnown RBP20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 ZMYM5Q9UJ78 669 aa20.04■□□□□ 0.8
CTDSP1-207ENST00000473420 LRRC53A6NM62 1247 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 SOBPA7XYQ1 873 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 MOSPD3O75425 235 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 YWHAQP27348 245 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 KIF11P52732 1056 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 TJAP1Q5JTD0 557 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 GET4Q7L5D6 327 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 GPRIN1Q7Z2K8 1008 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 ADHFE1Q8IWW8 467 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 ZNF397Q8NF99 534 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 ITFG1Q8TB96 612 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 SHKBP1Q8TBC3 707 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 STK32AQ8WU08 396 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 DDX1Q92499 740 aaKnown RBP20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 ACSF2Q96CM8 615 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 TCEAL4Q96EI5 215 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 HSFY1Q96LI6 401 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 SLITRK1Q96PX8 696 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 LHX5Q9H2C1 402 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 NOCTQ9UK39 431 aaKnown RBP20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 CAPN11Q9UMQ6 739 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 USP3Q9Y6I4 520 aa20.03■□□□□ 0.8
CTDSP1-207ENST00000473420 NCANO14594 1321 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 A0A1W2PRU2 124 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 GYPCP04921 128 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 CEBPBP17676 345 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 RPL34P49207 117 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 ZBED6P86452 979 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 ARHGAP15Q53QZ3 475 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 DENND1BQ6P3S1 775 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 TMEM150AQ86TG1 271 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 NOP9Q86U38 636 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 SCML4Q8N228 414 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 SCAMP5Q8TAC9 235 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 FGF13Q92913 245 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 MRFAP1L1Q96HT8 127 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 ATXN3LQ9H3M9 355 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 CYLDQ9NQC7 956 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 GDE1Q9NZC3 331 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 AIPL1Q9NZN9 384 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 CDH7Q9ULB5 785 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 CEP83Q9Y592 693 aa20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 TCF20Q9UGU0 1960 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-207ENST00000473420 LOC730098B7Z3J9 87 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 TULP2O00295 520 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 TADA3O75528 432 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 CFHP08603 1231 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 DDX6P26196 483 aaKnown RBP eCLIP20.01■□□□□ 0.795e-6■■■■■ 34.8
CTDSP1-207ENST00000473420 GBP2P32456 591 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 SSTR3P32745 418 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 TAF10Q12962 218 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 SFMBT2Q5VUG0 894 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 CCDC186Q7Z3E2 898 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 NPAS3Q8IXF0 933 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 PLCD3Q8N3E9 789 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 TDRD5Q8NAT2 981 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 MRPS31Q92665 395 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 SYN2Q92777 582 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 FBXO32Q969P5 355 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 MYADMQ96S97 322 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 TRPM5Q9NZQ8 1165 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 EPS15L1Q9UBC2 864 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 SCML2Q9UQR0 700 aa20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 LUC7L2Q9Y383 392 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-207ENST00000473420 HELZP42694 1942 aaKnown RBP20■□□□□ 0.79
CTDSP1-207ENST00000473420 LSM8O95777 96 aaKnown RBP20■□□□□ 0.79
CTDSP1-207ENST00000473420 PFKLP17858 780 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 CDH5P33151 784 aaPredicted RBP20■□□□□ 0.79
CTDSP1-207ENST00000473420 ACADSBP45954 432 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 ZNF75DP51815 510 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 CDR2Q01850 454 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 ZP2Q05996 745 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 IFRD2Q12894 506 aaPredicted RBP20■□□□□ 0.79
CTDSP1-207ENST00000473420 TEAD2Q15562 447 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 SNX30Q5VWJ9 437 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 PMF1Q6P1K2 205 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 IRF2BP2Q7Z5L9 587 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 ZDHHC14Q8IZN3 488 aa20■□□□□ 0.79
CTDSP1-207ENST00000473420 ING5Q8WYH8 240 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms