RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ADSSP30520 456 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MLH1P40692 756 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 RNF144AP50876 292 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PTENP60484 403 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 CDC42EP1Q00587 391 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MYL7Q01449 175 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 LRMPQ12912 555 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 TBX2Q13207 712 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PRPF4BQ13523 1007 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 SNRNP35Q16560 246 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF568Q3ZCX4 644 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ATF7IP2Q5U623 682 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 FUT10Q6P4F1 479 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ZPBP2Q6X784 338 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF852Q6ZMS4 543 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 INTS8Q75QN2 995 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 CBWD2Q8IUF1 395 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 NPAS3Q8IXF0 933 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 GPD1LQ8N335 351 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 CELF5Q8N6W0 485 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 SLC35C1Q96A29 364 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF830Q96NB3 372 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 FAM193BQ96PV7 902 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 ERGIC2Q96RQ1 377 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 INSM2Q96T92 566 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 GAD1Q99259 594 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 NELL2Q99435 816 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 FAM213AQ9BRX8 229 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MSTO1Q9BUK6 570 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 LSM14BQ9BX40 385 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 NFKBIZQ9BYH8 718 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PLA2G2FQ9BZM2 168 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PHACTR1Q9C0D0 580 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MINDY3Q9H8M7 445 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 IFT122Q9HBG6 1241 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 HEBP1Q9NRV9 189 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 PRMT7Q9NVM4 692 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 MIOSQ9NXC5 875 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 GCNT4Q9P109 453 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 AGO2Q9UKV8 859 aaKnown RBP6.84□□□□□ -1.31
HDAC1-205ENST00000472928 RAB23Q9ULC3 237 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 SIK3Q9Y2K2 1263 aa6.84□□□□□ -1.31
HDAC1-205ENST00000472928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.84□□□□□ -1.316e-8■■■□□ 16.3
HDAC1-205ENST00000472928 A0A0B4J269 797 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ARL5CA6NH57 179 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 C1QTNF9BB2RNN3 333 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 AKR1B15C9JRZ8 316 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ACKR2O00590 384 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 KIAA0391O15091 583 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 MAPK13O15264 365 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 NCAM2O15394 837 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CCL16O15467 120 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ADAM12O43184 909 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 NRDCO43847 1150 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 EXTL3O43909 919 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ERLIN2O94905 339 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 POU2F2P09086 479 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 HNRNPA1P09651 372 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 C1QTNF9P0C862 333 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 TRIM21P19474 475 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 BRD2P25440 801 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 HOXA9P31269 272 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 MXI1P50539 228 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 SCNN1GP51170 649 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 VAMP7P51809 220 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 POU5F1BQ06416 359 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CYP24A1Q07973 514 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ADCY1Q08828 1119 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 SRSF5Q13243 272 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 GAS6Q14393 721 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 USP41Q3LFD5 358 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 SLFN12LQ6IEE8 588 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 PRSS55Q6UWB4 352 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 MPZL3Q6UWV2 235 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 SRGAP1Q7Z6B7 1085 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CNGA4Q8IV77 575 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ETFBKMTQ8IXQ9 262 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CACTINQ8WUQ7 758 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 TMEM174Q8WUU8 243 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CPLX3Q8WVH0 158 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 DDX1Q92499 740 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CPB2Q96IY4 423 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ZBTB45Q96K62 511 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ZFP42Q96MM3 310 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ACO2Q99798 780 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CLSTN3Q9BQT9 956 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 CRACR2AQ9BSW2 395 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 EIF2AQ9BY44 585 aaKnown RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 HAPLN2Q9GZV7 340 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 FZD8Q9H461 694 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 TOPORSQ9NS56 1045 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 RXFP3Q9NSD7 469 aa6.83□□□□□ -1.32
HDAC1-205ENST00000472928 FAM207AQ9NSI2 230 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 KIAA1522Q9P206 1035 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-205ENST00000472928 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms