RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 RRAGBQ5VZM2 374 aa8.22□□□□□ -1.09
SGCE-210ENST00000472326 PJA1Q8NG27 643 aa8.22□□□□□ -1.09
SGCE-210ENST00000472326 BRIP1Q9BX63 1249 aa8.22□□□□□ -1.09
SGCE-210ENST00000472326 UNKQ9C0B0 810 aaKnown RBP8.22□□□□□ -1.09
SGCE-210ENST00000472326 GEMIN8Q9NWZ8 242 aaKnown RBP8.22□□□□□ -1.09
SGCE-210ENST00000472326 ZNF212Q9UDV6 495 aa8.22□□□□□ -1.09
SGCE-210ENST00000472326 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
SGCE-210ENST00000472326 COL11A2P13942 1736 aaPredicted RBP8.21□□□□□ -1.09
SGCE-210ENST00000472326 POM121BA6NF01 834 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 PRC1O43663 620 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 IL18RAPO95256 599 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 PARP1P09874 1014 aaKnown RBP8.21□□□□□ -1.1
SGCE-210ENST00000472326 TPH1P17752 444 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
SGCE-210ENST00000472326 IL1R2P27930 398 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 CTGFP29279 349 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 PRKAR1BP31321 381 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 PRIM2P49643 509 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 BCAT1P54687 386 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 TPTEP56180 551 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 CYP1B1Q16678 543 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 ZNF750Q32MQ0 723 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 PCID2Q5JVF3 399 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 ANKRD16Q6P6B7 361 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 Q6ZWC4 215 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 PARS2Q7L3T8 475 aaKnown RBP8.21□□□□□ -1.1
SGCE-210ENST00000472326 DPCDQ9BVM2 203 aaPredicted RBP8.21□□□□□ -1.1
SGCE-210ENST00000472326 NAA15Q9BXJ9 866 aaKnown RBP8.21□□□□□ -1.1
SGCE-210ENST00000472326 TRIM5Q9C035 493 aa8.21□□□□□ -1.1
SGCE-210ENST00000472326 OVOL3O00110 214 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 ZNF213O14771 459 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 CD3EAPO15446 510 aaKnown RBP8.2□□□□□ -1.1
SGCE-210ENST00000472326 PDE8BO95263 885 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 UQCRC1P31930 480 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 CASP5P51878 434 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 TBX4P57082 545 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 NAPRTQ6XQN6 538 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 WDR53Q7Z5U6 358 aaPredicted RBP8.2□□□□□ -1.1
SGCE-210ENST00000472326 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
SGCE-210ENST00000472326 MACROD1Q9BQ69 325 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 PTGFRNQ9P2B2 879 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 PADI4Q9UM07 663 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 WNT6Q9Y6F9 365 aa8.2□□□□□ -1.1
SGCE-210ENST00000472326 AP4M1O00189 453 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 CAND2O75155 1236 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 ANXA2P07355 339 aaKnown RBP8.19□□□□□ -1.1
SGCE-210ENST00000472326 PROK1P58294 105 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 AARS2Q5JTZ9 985 aaKnown RBP8.19□□□□□ -1.1
SGCE-210ENST00000472326 PLAG1Q6DJT9 500 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 RNF44Q7L0R7 432 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 CCDC33Q8N5R6 958 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 RP9Q8TA86 221 aaKnown RBP8.19□□□□□ -1.1
SGCE-210ENST00000472326 PARD3BQ8TEW8 1205 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 DHX36Q9H2U1 1008 aaKnown RBP8.19□□□□□ -1.1
SGCE-210ENST00000472326 GJB4Q9NTQ9 266 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 SH3BP4Q9P0V3 963 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 DKK4Q9UBT3 224 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 ADAMTS5Q9UNA0 930 aa8.19□□□□□ -1.1
SGCE-210ENST00000472326 DRG1Q9Y295 367 aaKnown RBP8.19□□□□□ -1.1
SGCE-210ENST00000472326 AGPSO00116 658 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 FOXN3O00409 490 aaPredicted RBP8.18□□□□□ -1.1
SGCE-210ENST00000472326 KRT18P05783 430 aaKnown RBP8.18□□□□□ -1.1
SGCE-210ENST00000472326 SOX10P56693 466 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 CYP4F2P78329 520 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 E2F1Q01094 437 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 HLTFQ14527 1009 aaKnown RBP eCLIP8.18□□□□□ -1.1
SGCE-210ENST00000472326 SLC29A4Q7RTT9 530 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 FANCBQ8NB91 859 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
SGCE-210ENST00000472326 IPCEF1Q8WWN9 437 aaPredicted RBP8.18□□□□□ -1.1
SGCE-210ENST00000472326 IQCDQ96DY2 449 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 LENG8Q96PV6 779 aaPredicted RBP8.18□□□□□ -1.1
SGCE-210ENST00000472326 PRR25Q96S07 402 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 FSD1LQ9BXM9 530 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 SERGEFQ9UGK8 458 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 GABRQQ9UN88 632 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 USP22Q9UPT9 525 aa8.18□□□□□ -1.1
SGCE-210ENST00000472326 NPSP0C0P6 89 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 TSHRP16473 764 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 EPHA3P29320 983 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 NTSR1P30989 418 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 STT3AP46977 705 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 PGDP52209 483 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 L1TD1Q5T7N2 865 aaKnown RBP8.17□□□□□ -1.1
SGCE-210ENST00000472326 CEP85Q6P2H3 762 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 ATP11CQ8NB49 1132 aa8.17□□□□□ -1.1
SGCE-210ENST00000472326 ZNF764Q96H86 408 aaPredicted RBP8.17□□□□□ -1.1
SGCE-210ENST00000472326 TARM1B6A8C7 271 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 A1BGP04217 495 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 PHKG2P15735 406 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 FPR3P25089 353 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 MTHFSP49914 203 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 IFIT5Q13325 482 aaKnown RBP8.16□□□□□ -1.1
SGCE-210ENST00000472326 TMEM119Q4V9L6 283 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 IL31Q6EBC2 164 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 DPY19L2P1Q6NXN4 242 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 SDR16C5Q8N3Y7 309 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 RNF152Q8N8N0 203 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 TBC1D5Q92609 795 aa8.16□□□□□ -1.1
SGCE-210ENST00000472326 NELL1Q92832 810 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms