RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SPEM2Q0P670 501 aa23.97■■□□□ 1.43
C9orf3-213ENST00000471978 IFRD2Q12894 506 aaPredicted RBP23.97■■□□□ 1.43
C9orf3-213ENST00000471978 CEP68Q76N32 757 aa23.97■■□□□ 1.43
C9orf3-213ENST00000471978 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.97■■□□□ 1.43
C9orf3-213ENST00000471978 NUP93Q8N1F7 819 aa23.97■■□□□ 1.43
C9orf3-213ENST00000471978 CD101Q93033 1021 aa23.97■■□□□ 1.43
C9orf3-213ENST00000471978 TNIP3Q96KP6 325 aa23.97■■□□□ 1.43
C9orf3-213ENST00000471978 RNF38Q9H0F5 515 aa23.97■■□□□ 1.43
C9orf3-213ENST00000471978 ATP8B3O60423 1300 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 PRR5-ARHGAP8B1AHC4 643 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 NFATC1O95644 943 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 PXNP49023 591 aaPredicted RBP23.96■■□□□ 1.43
C9orf3-213ENST00000471978 SLC7A9P82251 487 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 ARHGAP8P85298 464 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 FBXO43Q4G163 708 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 CEP135Q66GS9 1140 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 TMC2Q8TDI7 906 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 CCDC47Q96A33 483 aaKnown RBP23.96■■□□□ 1.43
C9orf3-213ENST00000471978 MED10Q9BTT4 135 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 SDCBP2Q9H190 292 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 FRMD4BQ9Y2L6 1034 aa23.96■■□□□ 1.43
C9orf3-213ENST00000471978 HELZP42694 1942 aaKnown RBP23.95■■□□□ 1.42
C9orf3-213ENST00000471978 FAM237AA0A1B0GTK4 181 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 CALUO43852 315 aaPredicted RBP23.95■■□□□ 1.42
C9orf3-213ENST00000471978 PRR29P0C7W0 189 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 P4HA1P13674 534 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 SDHBP21912 280 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 YWHAQP27348 245 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 SGSM1Q2NKQ1 1148 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 ZACNQ401N2 412 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 KCNK16Q96T55 309 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 SMPD4Q9NXE4 827 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 CPQQ9Y646 472 aa23.95■■□□□ 1.42
C9orf3-213ENST00000471978 RTN3O95197 1032 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-213ENST00000471978 KIF20AO95235 890 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 OLFM2O95897 454 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 OAS1P00973 400 aaKnown RBP23.94■■□□□ 1.42
C9orf3-213ENST00000471978 PAQR9Q6ZVX9 377 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 FAM35AQ86V20 835 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 RPLP0P6Q8NHW5 317 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 EZH1Q92800 747 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-213ENST00000471978 FBXO32Q969P5 355 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 SCAND2PQ9GZW5 306 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-213ENST00000471978 POLR3BQ9NW08 1133 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-213ENST00000471978 TRAF3IP3Q9Y228 551 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 ATP6V1DQ9Y5K8 247 aa23.94■■□□□ 1.42
C9orf3-213ENST00000471978 ATG2BQ96BY7 2078 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 CCDC163A0A0D9SF12 145 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 IKBKBO14920 756 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 LRP3O75074 770 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 RHOBTB3O94955 611 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 SV2AQ7L0J3 742 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 FILIP1Q7Z7B0 1213 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 ACOT1Q86TX2 421 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 FAM160A2Q8N612 972 aaPredicted RBP23.93■■□□□ 1.42
C9orf3-213ENST00000471978 PDZD8Q8NEN9 1154 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 OVCA2Q8WZ82 227 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 TAF4BQ92750 862 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 SMARCD1Q96GM5 515 aa23.93■■□□□ 1.42
C9orf3-213ENST00000471978 DMAP1Q9NPF5 467 aaPredicted RBP23.93■■□□□ 1.42
C9orf3-213ENST00000471978 CDV3Q9UKY7 258 aaKnown RBP23.93■■□□□ 1.42
C9orf3-213ENST00000471978 RPP40O75818 363 aaKnown RBP23.92■■□□□ 1.42
C9orf3-213ENST00000471978 MBL2P11226 248 aaPredicted RBP23.92■■□□□ 1.42
C9orf3-213ENST00000471978 DPYDQ12882 1025 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 C1orf220Q5T0J3 134 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 CAMKK1Q8N5S9 505 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 KIAA1958Q8N8K9 716 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 SCAMP5Q8TAC9 235 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 GAB3Q8WWW8 586 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 CFAP97Q9P2B7 532 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 MAPK8IP1Q9UQF2 711 aa23.92■■□□□ 1.42
C9orf3-213ENST00000471978 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.92■■□□□ 1.42
C9orf3-213ENST00000471978 A0A1W2PQ27 194 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 A0A1W2PQ64 194 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 A0A1W2PQD8 194 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 SLC9A3R1O14745 358 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-213ENST00000471978 TNFRSF10BO14763 440 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 MAPK13O15264 365 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 AP1G2O75843 785 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 ASS1P00966 412 aaKnown RBP23.91■■□□□ 1.42
C9orf3-213ENST00000471978 PIK3CAP42336 1068 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 VAMP7P51809 220 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 NDST1P52848 882 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 SLC5A3P53794 718 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 ATXN1P54253 815 aaKnown RBP23.91■■□□□ 1.42
C9orf3-213ENST00000471978 ORC1Q13415 861 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 SPOPLQ6IQ16 392 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 KRBA2Q6ZNG9 492 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 ADGRG2Q8IZP9 1017 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 FUKQ8N0W3 1084 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 HHIPQ96QV1 700 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 KRT82Q9NSB4 513 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 SEMA4GQ9NTN9 838 aa23.91■■□□□ 1.42
C9orf3-213ENST00000471978 CHORDC1Q9UHD1 332 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-213ENST00000471978 MED19A0JLT2 244 aaPredicted RBP23.9■■□□□ 1.42
C9orf3-213ENST00000471978 SCAMP3O14828 347 aaKnown RBP23.9■■□□□ 1.42
C9orf3-213ENST00000471978 HLA-DRAP01903 254 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 CYP17A1P05093 508 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 CCDC192P0DO97 292 aa23.9■■□□□ 1.42
C9orf3-213ENST00000471978 CCDC130P13994 396 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms