RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 ASB2Q96Q27 587 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 LRRC27Q9C0I9 530 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 DHX36Q9H2U1 1008 aaKnown RBP2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 TRIM36Q9NQ86 728 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 AFF4Q9UHB7 1163 aaKnown RBP2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 TPCN1Q9ULQ1 816 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 NOB1Q9ULX3 412 aaKnown RBP2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 L1RE1Q9UN81 338 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 EID1Q9Y6B2 187 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 CDY1Q9Y6F8 540 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 SHROOM4Q9ULL8 1493 aa2.9□□□□□ -1.95
NCKAP1-203ENST00000471640 GOLGA6CA6NDK9 693 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 GOLGA6BA6NDN3 693 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 PRRT4C9JH25 899 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 ADAMTS3O15072 1205 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 HRGP04196 525 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 PRR35P0CG20 571 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 NHLRC4P0CG21 123 aaPredicted RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 GOLGA6DP0CG33 693 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 MYBP10242 640 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 BRAFP15056 766 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 PHKG2P15735 406 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 HOXB6P17509 224 aaKnown RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 KELP23276 732 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 EPHA3P29320 983 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 MTHFSP49914 203 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 SUMO2P61956 95 aaKnown RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 E2F1Q01094 437 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 MLC1Q15049 377 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 POLD3Q15054 466 aaPredicted RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 APOA5Q6Q788 366 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 CATSPERGQ6ZRH7 1159 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 MICU3Q86XE3 530 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 RAVER1Q8IY67 606 aaKnown RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 ANKRD13AQ8IZ07 590 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 SIRT6Q8N6T7 355 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 TERB1Q8NA31 727 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 PNLDC1Q8NA58 520 aaKnown RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 OR56A3Q8NH54 315 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 SMCR8Q8TEV9 937 aaPredicted RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 SCARB1Q8WTV0 552 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 LRTOMTQ8WZ04 291 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 LENG8Q96PV6 779 aaPredicted RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 FYTTD1Q96QD9 318 aaKnown RBP2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 C17orf80Q9BSJ5 609 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 TRIM5Q9C035 493 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 CIPCQ9C0C6 399 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 GOLGA6AQ9NYA3 693 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 TFCP2L1Q9NZI6 479 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 RNF7Q9UBF6 113 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 AMFRQ9UKV5 643 aa2.89□□□□□ -1.95
NCKAP1-203ENST00000471640 WDR91A4D1P6 747 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 TMEM233B4DJY2 109 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 BTBD19C9JJ37 291 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 PYCARD-AS1I3L0S3 204 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 CD3EAPO15446 510 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 PRPF3O43395 683 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 TSPAN6O43657 245 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 MGEA5O60502 916 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 SRGAP2O75044 1071 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 ZBED1O96006 694 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 CYP2D6P10635 497 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 RPL17P18621 184 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 GKP32189 559 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 RENBPP51606 427 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 SUMO3P55854 103 aaPredicted RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 FAM193AP78312 1265 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 TIAL1Q01085 375 aaKnown RBP eCLIP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 GBX1Q14549 363 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 LRRC41Q15345 812 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 CNGA2Q16280 664 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 L1TD1Q5T7N2 865 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 ZNF626Q68DY1 528 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 FCRL6Q6DN72 434 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 ZNF425Q6IV72 752 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 SLC18B1Q6NT16 456 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 DARS2Q6PI48 645 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 SERPINA13PQ6UXR4 307 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 CHST15Q7LFX5 561 aaPredicted RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 YTHDF3Q7Z739 585 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 CHSY1Q86X52 802 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 COL23A1Q86Y22 540 aaPredicted RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 GALNT16Q8N428 558 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 C8orf58Q8NAV2 365 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 TMEM171Q8WVE6 324 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 IPCEF1Q8WWN9 437 aaPredicted RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 RPL36ALQ969Q0 106 aaKnown RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 RITA1Q96K30 269 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 ZNF668Q96K58 619 aaPredicted RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 ZNF778Q96MU6 729 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 PRR25Q96S07 402 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 MACROD1Q9BQ69 325 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 VN1R3Q9BXE9 311 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 ZCWPW1Q9H0M4 648 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 FAM83DQ9H4H8 585 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 GBA2Q9HCG7 927 aaPredicted RBP2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 SNX15Q9NRS6 342 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 SACM1LQ9NTJ5 587 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 STK32BQ9NY57 414 aa2.88□□□□□ -1.95
NCKAP1-203ENST00000471640 DNMT3BQ9UBC3 853 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms