RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ZSCAN5DPP0CG00 497 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 P4HA1P13674 534 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 KDELR1P24390 212 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 ADCY8P40145 1251 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 ARSEP51690 589 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 NDST1P52848 882 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 HIC1Q14526 733 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 PCBP1Q15365 356 aaKnown RBP eCLIP6.74□□□□□ -1.33
SPEN-204ENST00000471538 RNASEH2BQ5TBB1 312 aaKnown RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 KAZNQ674X7 775 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 C6orf89Q6UWU4 347 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 ALKAL1Q6UXT8 129 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 BBS12Q6ZW61 710 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 ZNF365Q70YC5 407 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 DPP9Q86TI2 863 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 TTC39CQ8N584 583 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 EMC1Q8N766 993 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 UHMK1Q8TAS1 419 aaKnown RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 IPO4Q8TEX9 1081 aaKnown RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 ACSF2Q96CM8 615 aaPredicted RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 ZMAT2Q96NC0 199 aaKnown RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 SERPINB12Q96P63 405 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 PEBP4Q96S96 227 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 FRMD8P1Q9BZ68 369 aaPredicted RBP6.74□□□□□ -1.33
SPEN-204ENST00000471538 PCDH9Q9HC56 1237 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 SETD4Q9NVD3 440 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 CNTN3Q9P232 1028 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 LGALS13Q9UHV8 139 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 GJD2Q9UKL4 321 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 KIAA1257Q9ULG3 409 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 PTCH2Q9Y6C5 1203 aa6.74□□□□□ -1.33
SPEN-204ENST00000471538 NRCAMQ92823 1304 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 TRIP11Q15643 1979 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 LRRD1A4D1F6 860 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 C2CD4BA6NLJ0 364 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 E7EVH7 732 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 NPTXRO95502 500 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 ACSL3O95573 720 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 TRUB2O95900 331 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 MYCP01106 439 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 CD48P09326 243 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 ZNF865P0CJ78 1059 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 SMIM10L2AP0DMW4 78 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 SMIM10L2BP0DMW5 78 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 DARSP14868 501 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 ETS1P14921 441 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 CHN1P15882 459 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 ATF7P17544 494 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 DRD4P21917 467 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 MIPP30301 263 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 HOXC8P31273 242 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 PCK1P35558 622 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 VPS41P49754 854 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 ZNF143P52747 638 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 PRR20EP86478 221 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 PRR20CP86479 221 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 PRR20DP86480 221 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 PRR20BP86481 221 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 PRR20AP86496 221 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 CDC42EP1Q00587 391 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 STILQ15468 1287 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 KYNUQ16719 465 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 QPCTQ16769 361 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 HADHQ16836 314 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 LONRF1Q17RB8 773 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 KIZQ2M2Z5 673 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 P3H1Q32P28 736 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 ODF2Q5BJF6 829 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 XKR4Q5GH76 650 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 SWT1Q5T5J6 900 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 SLC27A1Q6PCB7 646 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 FAM183BPQ6ZVS7 135 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 LIMS2Q7Z4I7 341 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 YTHDF3Q7Z739 585 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 EXOC3L1Q86VI1 746 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 CCDC25Q86WR0 208 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 TTC30AQ86WT1 665 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 LRRC52Q8N7C0 313 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 MDM1Q8TC05 714 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 USP6NLQ92738 828 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 PIWIL1Q96J94 861 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 ZNF317Q96PQ6 595 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 XPO6Q96QU8 1125 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 MRPL45Q9BRJ2 306 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 ADPGKQ9BRR6 497 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 NT5C1AQ9BXI3 368 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 EIF2AQ9BY44 585 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 GCOM2Q9BZD3 368 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 PHACTR1Q9C0D0 580 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 STMN4Q9H169 189 aaPredicted RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 PPANQ9NQ55 473 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 SNTG2Q9NY99 539 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 FLRT1Q9NZU1 646 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 TUBGCP4Q9UGJ1 667 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 TSPAN16Q9UKR8 245 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 FAM169AQ9Y6X4 670 aa6.73□□□□□ -1.33
SPEN-204ENST00000471538 LAMA2P24043 3122 aaKnown RBP6.73□□□□□ -1.33
SPEN-204ENST00000471538 SCN1AP35498 2009 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms