RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 RNF38Q9H0F5 515 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 SDCBP2Q9H190 292 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 EPC1Q9H2F5 836 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 EBF3Q9H4W6 596 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 TMEM8AQ9HCN3 771 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 CSNK1G1Q9HCP0 422 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 TRPC7Q9HCX4 862 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 TMEM30AQ9NV96 361 aa10.2□□□□□ -0.78
POLR1A-206ENST00000471427 DUS2Q9NX74 493 aaKnown RBP10.2□□□□□ -0.78
POLR1A-206ENST00000471427 HOOK1Q9UJC3 728 aaKnown RBP10.2□□□□□ -0.78
POLR1A-206ENST00000471427 GPR179Q6PRD1 2367 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 CCDC163A0A0D9SF12 145 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 SLC9A3R1O14745 358 aaPredicted RBP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 STX10O60499 249 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ATG13O75143 517 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 TRIM21P19474 475 aaKnown RBP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 CNR2P34972 360 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 GJA4P35212 333 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 GCLMP48507 274 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 TUBP50607 506 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 GALK1P51570 392 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 NDST1P52848 882 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ZXDBP98169 803 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 FKBP3Q00688 224 aaKnown RBP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 GRSF1Q12849 480 aaKnown RBP eCLIP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 USP4Q13107 963 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 PNOCQ13519 176 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 PON2Q15165 354 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 FBXO43Q4G163 708 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 TRIM68Q6AZZ1 485 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 FOXR2Q6PJQ5 311 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ACOT1Q86TX2 421 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ADGRG2Q8IZP9 1017 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 CPA6Q8N4T0 437 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 TTC39CQ8N584 583 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 CCDC26Q8TAB7 109 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 TAS1R2Q8TE23 839 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 SH3RF2Q8TEC5 729 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 RUBCNQ92622 972 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ATP2A3Q93084 1043 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 SMARCD1Q96GM5 515 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 HNRNPABQ99729 332 aaKnown RBP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 NT5C1AQ9BXI3 368 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 IMPG2Q9BZV3 1241 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 DNAI2Q9GZS0 605 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 COQ4Q9Y3A0 265 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 PCDHA5Q9Y5H7 936 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ZNF638Q14966 1978 aaKnown RBP10.19□□□□□ -0.78
POLR1A-206ENST00000471427 PTPRDP23468 1912 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 ANAPC1Q9H1A4 1944 aa10.19□□□□□ -0.78
POLR1A-206ENST00000471427 CHURC1-FNTBB4DL54 471 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 K7ESF4 209 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 LEFTY2O00292 366 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 EPB41P11171 864 aaKnown RBP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 ARSAP15289 507 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 PPP1R2P41236 205 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 PIK3CAP42336 1068 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 RAP1GAPP47736 663 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 SATB1Q01826 763 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 LRRC63Q05C16 580 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 SPOPLQ6IQ16 392 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 FSTL4Q6MZW2 842 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 TSSK4Q6SA08 328 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 FAM35AQ86V20 835 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 DDX42Q86XP3 938 aaKnown RBP eCLIP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 ZNF276Q8N554 614 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 CCDC150Q8NCX0 1101 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 FBXL13Q8NEE6 735 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 ZMIZ2Q8NF64 920 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 SCAMP5Q8TAC9 235 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 TTC8Q8TAM2 541 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 SMARCE1Q969G3 411 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 DHTKD1Q96HY7 919 aaPredicted RBP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 SMOQ99835 787 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 P2RY13Q9BPV8 354 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 UBXN6Q9BZV1 441 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 LINC00597Q9H2U6 94 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 FBXO44Q9H4M3 255 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 APOBEC3GQ9HC16 384 aaKnown RBP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 PNPLA8Q9NP80 782 aa10.18□□□□□ -0.78
POLR1A-206ENST00000471427 RBM12Q9NTZ6 932 aaKnown RBP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 CHORDC1Q9UHD1 332 aaPredicted RBP10.18□□□□□ -0.78
POLR1A-206ENST00000471427 PATJQ8NI35 1801 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 E2F8A0AVK6 867 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 PMM2O15305 246 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 SLC16A3O15427 465 aaKnown RBP10.17□□□□□ -0.78
POLR1A-206ENST00000471427 CILPO75339 1184 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 AP1G2O75843 785 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 NFATC1O95644 943 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 TRIM49P0CI25 452 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 TRIM49CP0CI26 452 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 IFNAR2P48551 515 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 SLC5A3P53794 718 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 HECTD3Q5T447 861 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 ANKRD40Q6AI12 368 aa10.17□□□□□ -0.78
POLR1A-206ENST00000471427 LONP2Q86WA8 852 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms