RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 SMPD4Q9NXE4 827 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ARHGAP26Q9UNA1 814 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 FRMD4BQ9Y2L6 1034 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ATP6V1DQ9Y5K8 247 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ANTXRLA6NF34 631 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 LEFTY2O00292 366 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 BEST1O76090 585 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 ASS1P00966 412 aaKnown RBP16.32■□□□□ 0.2
COL1A1-203ENST00000471344 IFNAR2P48551 515 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 VAMP7P51809 220 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 NDST1P52848 882 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 PDGFRLQ15198 375 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 FMR1NBQ8N0W7 255 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-203ENST00000471344 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
COL1A1-203ENST00000471344 C12orf29Q8N999 325 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 TAS1R2Q8TE23 839 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 TWNKQ96RR1 684 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 MED10Q9BTT4 135 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 FAM49BQ9NUQ9 324 aa16.32■□□□□ 0.2
COL1A1-203ENST00000471344 TRDMT1O14717 391 aaKnown RBP16.31■□□□□ 0.2
COL1A1-203ENST00000471344 TNFRSF10BO14763 440 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 RNF40O75150 1001 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 OAS1P00973 400 aaKnown RBP16.31■□□□□ 0.2
COL1A1-203ENST00000471344 PXNP49023 591 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-203ENST00000471344 PGFP49763 221 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 GALK1P51570 392 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 SLC5A3P53794 718 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 NFIL3Q16649 462 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 SGSM1Q2NKQ1 1148 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 CPA6Q8N4T0 437 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 ZMIZ2Q8NF64 920 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 SLC2A14Q8TDB8 520 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
COL1A1-203ENST00000471344 CEP295NLQ96MC4 621 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 SMOQ99835 787 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 FAM126AQ9BYI3 521 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-203ENST00000471344 NCDNQ9UBB6 729 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 CPQQ9Y646 472 aa16.31■□□□□ 0.2
COL1A1-203ENST00000471344 CEP250Q9BV73 2442 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 HRO43593 1189 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 AP1G2O75843 785 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 PAPSS2O95340 614 aaPredicted RBP16.3■□□□□ 0.2
COL1A1-203ENST00000471344 OLFM2O95897 454 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 YWHAQP27348 245 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL1A1-203ENST00000471344 PPP2R5DQ14738 602 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 GAB4Q2WGN9 574 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 NUP93Q8N1F7 819 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 ATP2A3Q93084 1043 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 FBXO32Q969P5 355 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 RMDN1Q96DB5 314 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 P2RY13Q9BPV8 354 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 GMIPQ9P107 970 aa16.3■□□□□ 0.2
COL1A1-203ENST00000471344 IKBKBO14920 756 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 MAPK13O15264 365 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 TCF3P15923 654 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 ID4P47928 161 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 NRLP54845 237 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 SLC7A9P82251 487 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 MESP2Q0VG99 397 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 ADAM9Q13443 819 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 PRR23BQ6ZRT6 265 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 WBP2Q969T9 261 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 JAKMIP2Q96AA8 810 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 SMARCD1Q96GM5 515 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 TNIP3Q96KP6 325 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 ZFRQ96KR1 1074 aaKnown RBP16.29■□□□□ 0.2
COL1A1-203ENST00000471344 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 CCSER2Q9H7U1 834 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 PARD6AQ9NPB6 346 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-203ENST00000471344 CFAP97Q9P2B7 532 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 CHORDC1Q9UHD1 332 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-203ENST00000471344 MYH10P35580 1976 aa16.29■□□□□ 0.2
COL1A1-203ENST00000471344 ATP8B3O60423 1300 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 EML5Q05BV3 1969 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 COCHO43405 550 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 KIF20AO95235 890 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 CYP17A1P05093 508 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 MBL2P11226 248 aaPredicted RBP16.28■□□□□ 0.2
COL1A1-203ENST00000471344 P4HA1P13674 534 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 CD58P19256 250 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 ADORA2BP29275 332 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 PSMC2P35998 433 aaKnown RBP16.28■□□□□ 0.2
COL1A1-203ENST00000471344 PRCPP42785 496 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
COL1A1-203ENST00000471344 MAP3K7CLP57077 242 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 INTS8Q75QN2 995 aaKnown RBP16.28■□□□□ 0.2
COL1A1-203ENST00000471344 SFTPA1Q8IWL2 248 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 CRYBG2Q8N1P7 616 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 WHAMMQ8TF30 809 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 TAF4BQ92750 862 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms