RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 RPS16P62249 146 aaKnown RBP6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 RAB32Q13637 225 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 GBX1Q14549 363 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 RNF220Q5VTB9 566 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 KIRREL2Q6UWL6 708 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 MYO1HQ8N1T3 1032 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 TTC8Q8TAM2 541 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 C1QTNF7Q9BXJ2 289 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 LPAR3Q9UBY5 353 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 TPCN1Q9ULQ1 816 aa6.11□□□□□ -1.43
PRPF40A-206ENST00000471167 ZBED1O96006 694 aa6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 LMO1P25800 156 aa6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 BCAT1P54687 386 aa6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 TUBA4AP68366 448 aa6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 SLC44A4Q53GD3 710 aa6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
PRPF40A-206ENST00000471167 MBD3L4A6NDZ8 208 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 MBD3L3A6NE82 208 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 F8W8V4 182 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 TP73O15350 636 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 RRP9O43818 475 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 PRR35P0CG20 571 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 U2AF1L5P0DN76 240 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 UQCRC1P31930 480 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 KRTAP10-11P60412 298 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 U2AF1Q01081 240 aaKnown RBP eCLIP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 SLC10A2Q12908 348 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 GRM1Q13255 1194 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 SUPT20HL1Q3ZLR7 823 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 L1TD1Q5T7N2 865 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 KIAA1614Q5VZ46 1190 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 ZNF626Q68DY1 528 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 NOL8Q76FK4 1167 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 LRTOMTQ8WZ04 291 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 RSPRY1Q96DX4 576 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 APIPQ96GX9 242 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 WDYHV1Q96HA8 205 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 SUCLG2Q96I99 432 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 CHST8Q9H2A9 424 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 OBP2AQ9NY56 170 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 RNF7Q9UBF6 113 aa6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 ZNF70Q9UC06 446 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 RGS17Q9UGC6 210 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-206ENST00000471167 SPRY2O43597 315 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 NPSP0C0P6 89 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 BRAFP15056 766 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 PRKAG1P54619 331 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 TPTEP56180 551 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 HTRA4P83105 476 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 SEMA5AQ13591 1074 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 FHL3Q13643 280 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 CCNIQ14094 377 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 ZNF425Q6IV72 752 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 TMED8Q6PL24 325 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 TRIM72Q6ZMU5 477 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 ZNF804AQ7Z570 1209 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 GLCCI1Q86VQ1 547 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 TERB1Q8NA31 727 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 C8orf58Q8NAV2 365 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 ZC3H10Q96K80 434 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 KLHL42Q9P2K6 505 aa6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 DRG1Q9Y295 367 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-206ENST00000471167 CD3EAPO15446 510 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 SRGAP2O75044 1071 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 PMPCBO75439 489 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 FGAP02671 866 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 CYP2D6P10635 497 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 HGFP14210 728 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 GKP32189 559 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 PTDSS1P48651 473 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 ZNF81P51508 661 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 RENBPP51606 427 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 TIRAPP58753 221 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 TIAL1Q01085 375 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 ZNF750Q32MQ0 723 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 CATSPERGQ6ZRH7 1159 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 BCDIN3DQ7Z5W3 292 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 ABHD11Q8NFV4 315 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 TIFAQ96CG3 184 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 SNX18Q96RF0 628 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 STK31Q9BXU1 1019 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 TRMT13Q9NUP7 481 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 DKK4Q9UBT3 224 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 AFF4Q9UHB7 1163 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 BTBD3Q9Y2F9 522 aa6.07□□□□□ -1.44
PRPF40A-206ENST00000471167 FRMPD2Q68DX3 1309 aaPredicted RBP6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 LOC102723971A0A1B0GUV8 181 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 H7C1Q1 480 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 EXOC3O60645 756 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 CDK4P11802 303 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 RHCEP18577 417 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 KLRC1P26715 233 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 EPHB2P29323 1055 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 ALDH5A1P51649 535 aaPredicted RBP6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 RHDQ02161 417 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 KLF9Q13886 244 aaPredicted RBP6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 POLD3Q15054 466 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms