RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 XPR1Q9UBH6 696 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 NWD1Q149M9 1564 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 USP47Q96K76 1375 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 DISP3Q9P2K9 1392 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 USP32Q8NFA0 1604 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 RPGRIP1LQ68CZ1 1315 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ADGRA2Q96PE1 1338 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ADM5C9JUS6 153 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 DCLK1O15075 740 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 MYBP10242 640 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 NPR1P16066 1061 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ARFIP2P53365 341 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ELLP55199 621 aaPredicted RBP5.05□□□□□ -1.6
COL9A1-206ENST00000470652 LOXL3P58215 753 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 TXNRD1Q16881 649 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ICE2Q659A1 982 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 LMBRD2Q68DH5 695 aaPredicted RBP5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ZNF783Q6ZMS7 281 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 PEG10Q86TG7 708 aaKnown RBP5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ADGRG3Q86Y34 549 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 KIAA0319LQ8IZA0 1049 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 OR6B3Q8NGW1 331 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 PBKQ96KB5 322 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 NT5C1BQ96P26 610 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 PRAM1Q96QH2 718 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 P2RX7Q99572 595 aaKnown RBP5.05□□□□□ -1.6
COL9A1-206ENST00000470652 PTDSS2Q9BVG9 487 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 TRIM54Q9BYV2 358 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 ZMAT3Q9HA38 289 aaKnown RBP5.05□□□□□ -1.6
COL9A1-206ENST00000470652 EHD3Q9NZN3 535 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 L1RE1Q9UN81 338 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 SHOC2Q9UQ13 582 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 CPS1P31327 1500 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 TULP4Q9NRJ4 1543 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 LTBP4Q8N2S1 1624 aa5.05□□□□□ -1.6
COL9A1-206ENST00000470652 GPRASP1Q5JY77 1395 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 DIP2AQ14689 1571 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 VWC2LB2RUY7 222 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 BTN3A1O00481 513 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 KITP10721 976 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 SLC11A2P49281 568 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 ZNF134P52741 427 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 UCP3P55916 312 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 GFOD2Q3B7J2 385 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 PLAC9Q5JTB6 97 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 ZNF362Q5T0B9 420 aaPredicted RBP5.04□□□□□ -1.6
COL9A1-206ENST00000470652 TEDDM1Q5T9Z0 273 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 VPS53Q5VIR6 699 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 FBXO42Q6P3S6 717 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 FKBP10Q96AY3 582 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 NAF1Q96HR8 494 aaKnown RBP5.04□□□□□ -1.6
COL9A1-206ENST00000470652 SUCLG2Q96I99 432 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 POLR3GLQ9BT43 218 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 COX11Q9Y6N1 276 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 MYOM1P52179 1685 aa5.04□□□□□ -1.6
COL9A1-206ENST00000470652 LRPPRCP42704 1394 aaKnown RBP5.04□□□□□ -1.6
COL9A1-206ENST00000470652 LRRC7Q96NW7 1537 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 MGST3O14880 152 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 URI1O94763 535 aaPredicted RBP5.03□□□□□ -1.6
COL9A1-206ENST00000470652 RHOP08100 348 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 PPIFP30405 207 aaKnown RBP5.03□□□□□ -1.6
COL9A1-206ENST00000470652 LRPAP1P30533 357 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 CACNB3P54284 484 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 SOX10P56693 466 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 WNT3P56703 355 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 LILRA4P59901 499 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 TBCCQ15814 346 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 RD3Q7Z3Z2 195 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 SRGAP1Q7Z6B7 1085 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 DTX2Q86UW9 622 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.03□□□□□ -1.6
COL9A1-206ENST00000470652 SLC15A4Q8N697 577 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 DNAJC5GQ8N7S2 189 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 IL31RAQ8NI17 732 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 ATRIPQ8WXE1 791 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 RFKQ969G6 155 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 TESK2Q96S53 571 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 TIMP4Q99727 224 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 DPH1Q9BZG8 443 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 ATP6V0A4Q9HBG4 840 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 SEMA4GQ9NTN9 838 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 TPCN1Q9ULQ1 816 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 PAXBP1Q9Y5B6 917 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 ENTPD2Q9Y5L3 495 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 FMN2Q9NZ56 1722 aa5.03□□□□□ -1.6
COL9A1-206ENST00000470652 A0A087WWL8 130 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 CFAP69A5D8W1 941 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 GCOM1H8Y6P7 765 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 PPM1DO15297 605 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 TBC1D4O60343 1298 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 TLR5O60602 858 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 NXPH3O95157 252 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 TTLL1O95922 423 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 ZFXP17010 805 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 WT1P19544 449 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 EN2P19622 333 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 SLC7A1P30825 629 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms