RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	OSTM1	Q86WC4	334 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	NPAS4	Q8IUM7	802 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	PSTK	Q8IV42	348 aa	Known RBP	11.52	□□□□□ -0.57
SND1-208	ENST00000470463	COLGALT2	Q8IYK4	626 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	DCP1B	Q8IZD4	617 aa	Known RBP	11.52	□□□□□ -0.57
SND1-208	ENST00000470463	FUK	Q8N0W3	1084 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	SIX6OS1	Q8N1H7	587 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	TMEM130	Q8N3G9	435 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	PRELID2	Q8N945	189 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	BBOF1	Q8ND07	529 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	ATL2	Q8NHH9	583 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	JOSD2	Q8TAC2	188 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	AEN	Q8WTP8	325 aa	Known RBP	11.52	□□□□□ -0.57
SND1-208	ENST00000470463	RXFP2	Q8WXD0	754 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	IRGQ	Q8WZA9	623 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	SLITRK1	Q96PX8	696 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	ERP44	Q9BS26	406 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	COLEC11	Q9BWP8	271 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	FUT8	Q9BYC5	575 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	CNGB3	Q9NQW8	809 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	AMACR	Q9UHK6	382 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	USP18	Q9UMW8	372 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	NME7	Q9Y5B8	376 aa		11.52	□□□□□ -0.57
SND1-208	ENST00000470463	TDRD15	B5MCY1	1934 aa	Known RBP	11.52	□□□□□ -0.57
SND1-208	ENST00000470463	LRRD1	A4D1F6	860 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	MAP2K7	O14733	419 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	MDM4	O15151	490 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	PAPSS1	O43252	624 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	PQBP1	O60828	265 aa	Known RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	EFCAB14	O75071	495 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	ZNF189	O75820	626 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	RARA	P10276	462 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	RGS7	P49802	495 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	AIF1	P55008	147 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	MRPS5	P82675	430 aa	Known RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	SLC7A5	Q01650	507 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	OGDH	Q02218	1023 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	SLC25A11	Q02978	314 aa	Known RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	YWHAH	Q04917	246 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	KLF1	Q13351	362 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	TFDP2	Q14188	446 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	NFE2	Q16621	373 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	INTS6L	Q5JSJ4	861 aa	Known RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	SPDYC	Q5MJ68	293 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	FAM171B	Q6P995	826 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	SPOCD1	Q6ZMY3	1216 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	CEP128	Q6ZU80	1094 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	FAM35A	Q86V20	835 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	PIGZ	Q86VD9	579 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	SCUBE3	Q8IX30	993 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	GOLGA6L1	Q8N7Z2	621 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	KCTD6	Q8NC69	237 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	DBF4B	Q8NFT6	615 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	CMAS	Q8NFW8	434 aa	Predicted RBP	11.51	□□□□□ -0.57
SND1-208	ENST00000470463	LRRC45	Q96CN5	670 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	OSBPL7	Q9BZF2	842 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	CSNK1G1	Q9HCP0	422 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	KRT82	Q9NSB4	513 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	RNF19A	Q9NV58	838 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	TBC1D13	Q9NVG8	400 aa		11.51	□□□□□ -0.57
SND1-208	ENST00000470463	TADA2A	O75478	443 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	DAB1	O75553	588 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	AP1G2	O75843	785 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	OAZ2	O95190	189 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	GJB6	O95452	261 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	TRUB2	O95900	331 aa	Known RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	ALDH2	P05091	517 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	MIP	P30301	263 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	NOS2	P35228	1153 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	MATK	P42679	507 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	TNNT3	P45378	269 aa	Predicted RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	MNX1	P50219	401 aa	Predicted RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	AFF1	P51825	1210 aa	Known RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	ZNF135	P52742	658 aa	Predicted RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	YWHAZ	P63104	245 aa	Known RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	CAV1	Q03135	178 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	MTMR3	Q13615	1198 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	IKBKE	Q14164	716 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	CASP8	Q14790	479 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	SIX1	Q15475	284 aa	Predicted RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	RAB41	Q5JT25	222 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	CLLU1OS	Q5K130	101 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	CLEC20A	Q6ZU45	233 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	BEND5	Q7L4P6	421 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	JAML	Q86YT9	394 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	KRT222	Q8N1A0	295 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	MREG	Q8N565	214 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	CCDC89	Q8N998	374 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	C3orf58	Q8NDZ4	430 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	HDAC7	Q8WUI4	952 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	LINC01599	Q8WXQ3	324 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	CENPI	Q92674	756 aa	Predicted RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	PCED1B	Q96HM7	432 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	DDX23	Q9BUQ8	820 aa	Known RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	MAK16	Q9BXY0	300 aa	Known RBP	11.5	□□□□□ -0.57
SND1-208	ENST00000470463	B3GNT5	Q9BYG0	378 aa		11.5	□□□□□ -0.57
SND1-208	ENST00000470463	DCLK3	Q9C098	648 aa		11.5	□□□□□ -0.57

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