RNA–Protein interactions for RNA: ENST00000470352.1

RPN2-208, Transcript of ribophorin II, human

TSL 2

Gene RPN2, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPN2-208	ENST00000470352	BRD9	Q9H8M2	597 aa		12.81	□□□□□ -0.36
RPN2-208	ENST00000470352	SAMSN1	Q9NSI8	373 aa	Known RBP	12.81	□□□□□ -0.36
RPN2-208	ENST00000470352	TDP1	Q9NUW8	608 aa		12.81	□□□□□ -0.36
RPN2-208	ENST00000470352	IL37	Q9NZH6	218 aa		12.81	□□□□□ -0.36
RPN2-208	ENST00000470352	KIAA1257	Q9ULG3	409 aa		12.81	□□□□□ -0.36
RPN2-208	ENST00000470352	PCDHB4	Q9Y5E5	795 aa		12.81	□□□□□ -0.36
RPN2-208	ENST00000470352	ZNF840P	A6NDX5	716 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	ZNF263	O14978	683 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	CHAD	O15335	359 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	CKM	P06732	381 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	VDR	P11473	427 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	CD19	P15391	556 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	RFX1	P22670	979 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	GDI1	P31150	447 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	BCAT1	P54687	386 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	MFAP3	P55082	362 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	PLCB2	Q00722	1185 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	STIL	Q15468	1287 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	VWA3B	Q502W6	1294 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	MIIP	Q5JXC2	388 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	CDKAL1	Q5VV42	579 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	SMYD5	Q6GMV2	418 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	PHLDB3	Q6NSJ2	640 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	RRAGA	Q7L523	313 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	BPIFB1	Q8TDL5	484 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	KAT5	Q92993	513 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	RSPRY1	Q96DX4	576 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	SHD	Q96IW2	340 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	DUSP16	Q9BY84	665 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	NAT10	Q9H0A0	1025 aa	Known RBP	12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	TRPV5	Q9NQA5	729 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	THG1L	Q9NWX6	298 aa	Known RBP	12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	HESX1	Q9UBX0	185 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	APEX2	Q9UBZ4	518 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	CA14	Q9ULX7	337 aa		12.8	□□□□□ -0.36
RPN2-208	ENST00000470352	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	KRBA1	A5PL33	1030 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	C2orf78	A6NCI8	922 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	HHLA1	C9JL84	531 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	PES1	O00541	588 aa	Known RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	LETM1	O95202	739 aa	Predicted RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	OAS1	P00973	400 aa	Known RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	PDGFB	P01127	241 aa	Predicted RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	TPM2	P07951	284 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	TUB	P50607	506 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	PRKCQ	Q04759	706 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	BST2	Q10589	180 aa	Known RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	USP4	Q13107	963 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	MLF2	Q15773	248 aa	Predicted RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	GOLGA7B	Q2TAP0	167 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	ARHGAP29	Q52LW3	1261 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	SNX30	Q5VWJ9	437 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	ANKRD52	Q8NB46	1076 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	FLCN	Q8NFG4	579 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	SCAMP5	Q8TAC9	235 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	USP13	Q92995	863 aa	Predicted RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	KREMEN1	Q96MU8	473 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	SMG9	Q9H0W8	520 aa	Known RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	TSPAN16	Q9UKR8	245 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	ARHGAP26	Q9UNA1	814 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	CNTN6	Q9UQ52	1028 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	SCML2	Q9UQR0	700 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	CCL26	Q9Y258	94 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	ZNF638	Q14966	1978 aa	Known RBP	12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	COL4A2	P08572	1712 aa		12.79	□□□□□ -0.36
RPN2-208	ENST00000470352	ANAPC1	Q9H1A4	1944 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ARNTL	O00327	626 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352		O00370	1275 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	OLFM2	O95897	454 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ABL1	P00519	1130 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ZDHHC11B	P0C7U3	371 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	SETSIP	P0DME0	302 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	TCF3	P15923	654 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	HDC	P19113	662 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	SLC9A1	P19634	815 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	PON1	P27169	355 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ZNF132	P52740	706 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ZNF77	Q15935	545 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	SLC44A4	Q53GD3	710 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	CWF19L1	Q69YN2	538 aa	Known RBP	12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	GPRIN1	Q7Z2K8	1008 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	TTC30A	Q86WT1	665 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ANKRD20A12P	Q8NF67	263 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	SLC22A12	Q96S37	553 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	UBXN6	Q9BZV1	441 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	TBC1D17	Q9HA65	648 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	TLR8	Q9NR97	1041 aa	Known RBP	12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	FANCL	Q9NW38	375 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	GMIP	Q9P107	970 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	HCN4	Q9Y3Q4	1203 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	MYO16	Q9Y6X6	1858 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	ZDBF2	Q9HCK1	2354 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	HELZ	P42694	1942 aa	Known RBP	12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	MYH10	P35580	1976 aa		12.78	□□□□□ -0.36
RPN2-208	ENST00000470352	XPO1	O14980	1071 aa	Known RBP	12.77	□□□□□ -0.37
RPN2-208	ENST00000470352	CYP26A1	O43174	497 aa		12.77	□□□□□ -0.37
RPN2-208	ENST00000470352	KRT5	P13647	590 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms