RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ASMTLO95671 621 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 HSPA4LO95757 839 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 HRGP04196 525 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 POLBP06746 335 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 KRT7P08729 469 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ZBTB48P10074 688 aaPredicted RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 GHRP10912 638 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ANXA8P13928 327 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 GAP43P17677 238 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 KELP23276 732 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 L1CAMP32004 1257 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 NUDT1P36639 197 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 OR1G1P47890 313 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PCP4P48539 62 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ADARP55265 1226 aaKnown RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PSMC5P62195 406 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 FAAP100Q0VG06 881 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RALGDSQ12967 914 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ACAP2Q15057 778 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 EZH2Q15910 746 aaKnown RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 FAM209BQ5JX69 171 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ANXA8L1Q5VT79 327 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 KCTD16Q68DU8 428 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ITPRIPL1Q6GPH6 555 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 WDR73Q6P4I2 378 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TMEM154Q6P9G4 183 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 C1orf228Q6PIY5 440 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 MACC1Q6ZN28 852 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RGS9BPQ6ZS82 235 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 CYP4V2Q6ZWL3 525 aaPredicted RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 HOMER1Q86YM7 354 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 MB21D2Q8IYB1 491 aaPredicted RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PM20D2Q8IYS1 436 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ADGRG2Q8IZP9 1017 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TTC5Q8N0Z6 440 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ELMOD1Q8N336 334 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 FBXL16Q8N461 479 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TTLL6Q8N841 843 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 NOA1Q8NC60 698 aaKnown RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RNF169Q8NCN4 708 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PIK3C3Q8NEB9 887 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF461Q8TAF7 563 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 FNDC8Q8TC99 324 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ADAMTS16Q8TE57 1224 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ADAMTS18Q8TE60 1221 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TNFRSF25Q93038 417 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PLD4Q96BZ4 506 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 GDAP1L1Q96MZ0 367 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TESK2Q96S53 571 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 WRNIP1Q96S55 665 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RMDN3Q96TC7 470 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 POP1Q99575 1024 aaKnown RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 C19orf43Q9BQ61 176 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PSD2Q9BQI7 771 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TBCDQ9BTW9 1192 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 TRIM62Q9BVG3 475 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ASPSCR1Q9BZE9 553 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 OSBPL6Q9BZF3 934 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 LHX5Q9H2C1 402 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 SERINC1Q9NRX5 453 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 NMRK1Q9NWW6 199 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 SNTG2Q9NY99 539 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 SIRPGQ9P1W8 387 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 GPN3Q9UHW5 284 aaPredicted RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ATP6V1HQ9UI12 483 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 NOB1Q9ULX3 412 aaKnown RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RPH3AQ9Y2J0 694 aaPredicted RBP5.36□□□□□ -1.55
COL3A1-205ENST00000470167 LRRC42Q9Y546 428 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 GRIN2DO15399 1336 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PHLPP2Q6ZVD8 1323 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 CLIP1P30622 1438 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ABCA5Q8WWZ7 1642 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 MAPKBP1O60336 1514 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ZMYM4Q5VZL5 1548 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 FGD5Q6ZNL6 1462 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC7Q96M83 1385 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 RAB3GAP2Q9H2M9 1393 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ABHD14A-ACY1A0A1B0GW23 586 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SYCE3A1L190 88 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 NEURL1BA8MQ27 555 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 BTN3A1O00481 513 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 APAF1O14727 1248 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PCDH17O14917 1159 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PER2O15055 1255 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 DDX3YO15523 660 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 RNMTO43148 476 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 TXNL1O43396 289 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PI15O43692 258 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 BRINP1O60477 761 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PIGNO95427 931 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 GNA14O95837 355 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 GAS8O95995 478 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 CLPTM1O96005 669 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 APOA4P06727 396 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 SLC3A2P08195 630 aaKnown RBP5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ARAFP10398 606 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 AKR1B1P15121 316 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 PHKG2P15735 406 aa5.35□□□□□ -1.55
COL3A1-205ENST00000470167 ITGA2P17301 1181 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms