RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 WNT6Q9Y6F9 365 aa17.4■□□□□ 0.38
GTF3C2-209ENST00000470115 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 RTN3O95197 1032 aaPredicted RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 EPB41P11171 864 aaKnown RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 YWHAQP27348 245 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 GTF2H1P32780 548 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 PDE6CP51160 858 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 ZXDBP98169 803 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SATB1Q01826 763 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 KRT39Q6A163 491 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 ANKRD40Q6AI12 368 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 Q6ZS52 159 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SPEM1Q8N4L4 309 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 ZBTB44Q8NCP5 570 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SCAMP5Q8TAC9 235 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SLC2A14Q8TDB8 520 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 OSCP1Q8WVF1 389 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 NELL1Q92832 810 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 FBXO32Q969P5 355 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 CHFRQ96EP1 664 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SMARCD1Q96GM5 515 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 TWNKQ96RR1 684 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 TSG101Q99816 390 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 SMOQ99835 787 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 LINC00597Q9H2U6 94 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 DMAP1Q9NPF5 467 aaPredicted RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 KRT82Q9NSB4 513 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 FAM49BQ9NUQ9 324 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 CHORDC1Q9UHD1 332 aaPredicted RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 HOOK1Q9UJC3 728 aaKnown RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 ARHGAP26Q9UNA1 814 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 PCDHGA2Q9Y5H1 932 aa17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
GTF3C2-209ENST00000470115 FANCMQ8IYD8 2048 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 TNFRSF10BO14763 440 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 GADD45BO75293 160 aaPredicted RBP17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 TDGF1P13385 188 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 PFKLP17858 780 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 CXCL12P48061 93 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 IFNAR2P48551 515 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 CCR3P51677 355 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 CCINQ13939 588 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 CCDC150Q8NCX0 1101 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 SEMA4DQ92854 862 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 NIF3L1Q9GZT8 377 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 ECT2Q9H8V3 914 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 CYP3A43Q9HB55 503 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 GVINP1Q7Z2Y8 2422 aa17.38■□□□□ 0.37
GTF3C2-209ENST00000470115 LEFTY2O00292 366 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 TRDMT1O14717 391 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 STX10O60499 249 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 BEST1O76090 585 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 OAS1P00973 400 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 TCF3P15923 654 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 CD58P19256 250 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 ADORA2BP29275 332 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 GJA4P35212 333 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 SLC5A3P53794 718 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 SLC7A9P82251 487 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 FKBP3Q00688 224 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 INCA1Q0VD86 236 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 PPP2R5DQ14738 602 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 EML3Q32P44 896 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 TMEM196Q5HYL7 178 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 NAIF1Q69YI7 327 aaPredicted RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 ZC3H3Q8IXZ2 948 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 CPA6Q8N4T0 437 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 SUMF1Q8NBK3 374 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 ZMIZ2Q8NF64 920 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 WHAMMQ8TF30 809 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 ATP2A3Q93084 1043 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 NT5C1AQ9BXI3 368 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 FAM126AQ9BYI3 521 aaPredicted RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 GTPBP4Q9BZE4 634 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 FBRSL1Q9HCM7 1045 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 C2orf42Q9NWW7 574 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 SMPD4Q9NXE4 827 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 IL37Q9NZH6 218 aa17.37■□□□□ 0.37
GTF3C2-209ENST00000470115 TRIM49BA6NDI0 452 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 CILPO75339 1184 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 OLFM2O95897 454 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 MXI1P50539 228 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 GALK1P51570 392 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 NRLP54845 237 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 MAP3K7CLP57077 242 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 AMPD2Q01433 879 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 GRSF1Q12849 480 aaKnown RBP eCLIP17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 TCERG1LQ5VWI1 586 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 FSTL4Q6MZW2 842 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 ELOA2Q8IYF1 753 aaPredicted RBP17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 SYNPOQ8N3V7 929 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 FBXL13Q8NEE6 735 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 PDZD8Q8NEN9 1154 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 OVCA2Q8WZ82 227 aa17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 HNRNPABQ99729 332 aaKnown RBP17.36■□□□□ 0.37
GTF3C2-209ENST00000470115 CSNK1G1Q9HCP0 422 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms