RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PTPRBP23467 1997 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 ZNF638Q14966 1978 aaKnown RBP12.87□□□□□ -0.35
LSM2-209ENST00000470083 OBSL1O75147 1896 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 A0A1B0GTW7 788 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 TBC1D3BA6NDS4 549 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 NDUFS2O75306 463 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 CILPO75339 1184 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 HLA-EP13747 358 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 NDUFV2P19404 249 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 MAOBP27338 520 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 EIF2S3P41091 472 aaKnown RBP12.87□□□□□ -0.35
LSM2-209ENST00000470083 LIG4P49917 911 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 SLC7A9P82251 487 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 CFHR1Q03591 330 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 PDIA5Q14554 519 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 IL27RAQ6UWB1 636 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 LRRC69Q6ZNQ3 347 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 SKAP1Q86WV1 359 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 LURAP1LQ8IV03 231 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 DNASE2BQ8WZ79 361 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 KCNN1Q92952 543 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 ACBD6Q9BR61 282 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 CLMPQ9H6B4 373 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 GAREM1Q9H706 876 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 CPSF3Q9UKF6 684 aaKnown RBP12.87□□□□□ -0.35
LSM2-209ENST00000470083 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
LSM2-209ENST00000470083 A0A0B4J269 797 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 H0YCG3 227 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 HNRNPDLO14979 420 aaKnown RBP12.86□□□□□ -0.35
LSM2-209ENST00000470083 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 PIGRP01833 764 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 NTSR1P30989 418 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 MATKP42679 507 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 ZNF174Q15697 407 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 SV2CQ496J9 727 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 PREPLQ4J6C6 727 aaPredicted RBP12.86□□□□□ -0.35
LSM2-209ENST00000470083 INTS6LQ5JSJ4 861 aaKnown RBP12.86□□□□□ -0.35
LSM2-209ENST00000470083 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 RHBDD1Q8TEB9 315 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 NXPE2Q96DL1 559 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 FUBP3Q96I24 572 aaKnown RBP eCLIP12.86□□□□□ -0.35
LSM2-209ENST00000470083 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 ASB7Q9H672 318 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 CPQQ9Y646 472 aa12.86□□□□□ -0.35
LSM2-209ENST00000470083 KNTC1P50748 2209 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 SCAMP3O14828 347 aaKnown RBP12.85□□□□□ -0.35
LSM2-209ENST00000470083 RRP8O43159 456 aaKnown RBP12.85□□□□□ -0.35
LSM2-209ENST00000470083 TNFSF14O43557 240 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 OLFM2O95897 454 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 TRIM29Q14134 588 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 PTPRNQ16849 979 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 MIB1Q86YT6 1006 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 ZCCHC9Q8N567 271 aaKnown RBP12.85□□□□□ -0.35
LSM2-209ENST00000470083 IGSF22Q8N9C0 903 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 TERB1Q8NA31 727 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 IPO4Q8TEX9 1081 aaKnown RBP12.85□□□□□ -0.35
LSM2-209ENST00000470083 ZNF560Q96MR9 790 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 CD93Q9NPY3 652 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 SMPD4Q9NXE4 827 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 CFAP97Q9P2B7 532 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 GTF3C4Q9UKN8 822 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 HCN2Q9UL51 889 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 STARD13Q9Y3M8 1113 aa12.85□□□□□ -0.35
LSM2-209ENST00000470083 SHROOM3Q8TF72 1996 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 MEI4A8MW99 385 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 PLK4O00444 970 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 HOXC11O43248 304 aaPredicted RBP12.84□□□□□ -0.35
LSM2-209ENST00000470083 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
LSM2-209ENST00000470083 TLX3O43711 291 aaPredicted RBP12.84□□□□□ -0.35
LSM2-209ENST00000470083 TULP3O75386 442 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 ACAT1P24752 427 aaKnown RBP12.84□□□□□ -0.35
LSM2-209ENST00000470083 CD6P30203 668 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 PNPLA4P41247 253 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 WASP42768 502 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 MAGEA11P43364 429 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 FOSBP53539 338 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 NCKAP1LP55160 1127 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 BNC1Q01954 994 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 GAD2Q05329 585 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 HLA-BQ31612 363 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 TMPRSS12Q86WS5 348 aa12.84□□□□□ -0.35
LSM2-209ENST00000470083 DDX42Q86XP3 938 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms