RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
HDAC3-204ENST00000469207 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
HDAC3-204ENST00000469207 WBP2Q969T9 261 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 KCNK16Q96T55 309 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 TTLL2Q9BWV7 592 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 TRIM9Q9C026 710 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 ZNF518BQ9C0D4 1074 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 BLZF1Q9H2G9 400 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 SNX25Q9H3E2 840 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 KBTBD4Q9NVX7 518 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 NXF1Q9UBU9 619 aaKnown RBP13.08□□□□□ -0.32
HDAC3-204ENST00000469207 ANGPTL2Q9UKU9 493 aa13.08□□□□□ -0.32
HDAC3-204ENST00000469207 SGK1O00141 431 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
HDAC3-204ENST00000469207 TOP3BO95985 862 aaKnown RBP13.07□□□□□ -0.32
HDAC3-204ENST00000469207 SPINK2P20155 84 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
HDAC3-204ENST00000469207 PGFP49763 221 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 MYL6P60660 151 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 ASIC1P78348 528 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 SLC7A9P82251 487 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 CYP24A1Q07973 514 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 SURF1Q15526 300 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 ELF2Q15723 593 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 USP39Q53GS9 565 aaKnown RBP13.07□□□□□ -0.32
HDAC3-204ENST00000469207 NAT16Q8N8M0 369 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 TXNDC5Q8NBS9 432 aaKnown RBP13.07□□□□□ -0.32
HDAC3-204ENST00000469207 PLEKHO2Q8TD55 490 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 ACDQ96AP0 544 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 EDEM2Q9BV94 578 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
HDAC3-204ENST00000469207 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
HDAC3-204ENST00000469207 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 CDX4O14627 284 aaPredicted RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 TRIM66O15016 1216 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 SPTLC2O15270 562 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 STX6O43752 255 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 TACC1O75410 805 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 KLF8O95600 359 aaPredicted RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 OLFM2O95897 454 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 OAS1P00973 400 aaKnown RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 MBL2P11226 248 aaPredicted RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 NOP14P78316 857 aaKnown RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 IRX4P78413 519 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 KDSRQ06136 332 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 MAPRE1Q15691 268 aaKnown RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 CRY1Q16526 586 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 TDRD10Q5VZ19 366 aaKnown RBP13.06□□□□□ -0.32
HDAC3-204ENST00000469207 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 PAQR9Q6ZVX9 377 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 ARMCX6Q7L4S7 300 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 IL17RCQ8NAC3 791 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 ERLEC1Q96DZ1 483 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 FNBP1Q96RU3 617 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 PNKPQ96T60 521 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 CGRRF1Q99675 332 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 TNMDQ9H2S6 317 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 SLC39A2Q9NP94 309 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 THADAQ6YHU6 1953 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 KIAA1549LQ6ZVL6 1849 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 CFAP47Q6ZTR5 3102 aa13.06□□□□□ -0.32
HDAC3-204ENST00000469207 PTPRDP23468 1912 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 A8MXQ7 604 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 TRIM24O15164 1050 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 COCHO43405 550 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 KAT7O95251 611 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 NOVA1P51513 510 aaKnown RBP13.05□□□□□ -0.32
HDAC3-204ENST00000469207 ORC1Q13415 861 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 PSMD6Q15008 389 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 TMEFF1Q8IYR6 380 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 NUP93Q8N1F7 819 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 XXYLT1Q8NBI6 393 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 PIGKQ92643 395 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 CNOT6LQ96LI5 555 aaKnown RBP13.05□□□□□ -0.32
HDAC3-204ENST00000469207 C7orf25Q9BPX7 421 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
HDAC3-204ENST00000469207 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 CCSER2Q9H7U1 834 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 KIAA1586Q9HCI6 787 aa13.05□□□□□ -0.32
HDAC3-204ENST00000469207 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms