RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 SCML4Q8N228 414 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 NEK11Q8NG66 645 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 ZSCAN18Q8TBC5 510 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-208ENST00000469123 ING5Q8WYH8 240 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 ELMO3Q96BJ8 720 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 TCEAL4Q96EI5 215 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 HSFY1Q96LI6 401 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 KREMEN1Q96MU8 473 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 NECAB3Q96P71 396 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-208ENST00000469123 SMOQ99835 787 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 LSM14BQ9BX40 385 aaKnown RBP9.04□□□□□ -0.96
SSBP1-208ENST00000469123 VPS16Q9H269 839 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 HSD3B7Q9H2F3 369 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 TSPY26PQ9H489 355 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 ZNF334Q9HCZ1 680 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-208ENST00000469123 SIX2Q9NPC8 291 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 CYLDQ9NQC7 956 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 TLR8Q9NR97 1041 aaKnown RBP9.04□□□□□ -0.96
SSBP1-208ENST00000469123 LIMD1Q9UGP4 676 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 TSPAN16Q9UKR8 245 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 DUSP12Q9UNI6 340 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.04□□□□□ -0.96
SSBP1-208ENST00000469123 SCML2Q9UQR0 700 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 CEP83Q9Y592 693 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 A0A0C4DFX4 3053 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 MYO16Q9Y6X6 1858 aa9.04□□□□□ -0.96
SSBP1-208ENST00000469123 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ZNF840PA6NDX5 716 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SART1O43290 800 aaKnown RBP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 FBXO21O94952 628 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SERPINC1P01008 464 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SRFP11831 508 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 PSMC3P17980 439 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SP100P23497 879 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 GNA15P30679 374 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ACADSBP45954 432 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 KIF11P52732 1056 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ZNF445P59923 1031 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ZXDAP98168 799 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 C1QBPQ07021 282 aaKnown RBP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SIGLEC14Q08ET2 396 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 TAF10Q12962 218 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ORC1Q13415 861 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 RAPGEF1Q13905 1077 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 CCDC142Q17RM4 750 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 GOLGA7BQ2TAP0 167 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 RAB41Q5JT25 222 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SDHAF4Q5VUM1 108 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 KLHDC10Q6PID8 442 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 C1orf228Q6PIY5 440 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 CCDC186Q7Z3E2 898 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ZNF677Q86XU0 584 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 FAM71AQ8IYT1 594 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 CMTM8Q8IZV2 173 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ZNF276Q8N554 614 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 CELF5Q8N6W0 485 aaKnown RBP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 ZMIZ2Q8NF64 920 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 GPR152Q8TDT2 470 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 KCTD13Q8WZ19 329 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 EDAQ92838 391 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 DNASE1L2Q92874 299 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 KAT5Q92993 513 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 MCRS1Q96EZ8 462 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 MSANTD3Q96H12 275 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 NOX5Q96PH1 765 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SPAG5Q96R06 1193 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 KCNK16Q96T55 309 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 C1QTNF1Q9BXJ1 281 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 MIS12Q9H081 205 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 LRRC4Q9HBW1 653 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 CNGB3Q9NQW8 809 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 SLC2A4RGQ9NR83 387 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 THG1LQ9NWX6 298 aaKnown RBP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 BCCIPQ9P287 314 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 MYO6Q9UM54 1294 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 NUMBLQ9Y6R0 609 aa9.03□□□□□ -0.96
SSBP1-208ENST00000469123 HELZP42694 1942 aaKnown RBP9.03□□□□□ -0.96
SSBP1-208ENST00000469123 TECTAO75443 2155 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 HHLA1C9JL84 531 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 M0QYV0 167 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 DLL1O00548 723 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 TADA3O75528 432 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 OLFM2O95897 454 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 ZDHHC11BP0C7U3 371 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 RALAP11233 206 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 USP8P40818 1118 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 CACNA2D1P54289 1103 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 MLLT6P55198 1093 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-208ENST00000469123 GOLGA8FQ08AF8 430 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 GOLGA8DPQ0D2H9 430 aa9.02□□□□□ -0.97
SSBP1-208ENST00000469123 KCNMA1Q12791 1236 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms