RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
CLRN1-204ENST00000468836 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 SPECC1L-ADORA2AF8WAN1 911 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 BMP6P22004 513 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 SOX9P48436 509 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 FMO5P49326 533 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 CUL2Q13617 745 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 RUNX3Q13761 415 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 RALGPS2Q86X27 583 aaPredicted RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 C1orf210Q8IVY1 113 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 SH3RF2Q8TEC5 729 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 NT5C1BQ96P26 610 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 TWNKQ96RR1 684 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 CYP2S1Q96SQ9 504 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 HNRNPABQ99729 332 aaKnown RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 DUSP9Q99956 384 aaKnown RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 CLSTN2Q9H4D0 955 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 EBF3Q9H4W6 596 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 DUS2Q9NX74 493 aaKnown RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 GTSE1Q9NYZ3 720 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 DACH1Q9UI36 760 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 ARHGAP26Q9UNA1 814 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 MTF2Q9Y483 593 aaPredicted RBP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLRN1-204ENST00000468836 MYO10Q9HD67 2058 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 KMT2EQ8IZD2 1858 aa13.76□□□□□ -0.21
CLRN1-204ENST00000468836 ARNTLO00327 626 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 CTHP32929 405 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 MLLT6P55198 1093 aaPredicted RBP13.75□□□□□ -0.21
CLRN1-204ENST00000468836 TNK2Q07912 1038 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 USP4Q13107 963 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 NR1H3Q13133 447 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 ZNF77Q15935 545 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 TRIM68Q6AZZ1 485 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 ZC3H14Q6PJT7 736 aaKnown RBP13.75□□□□□ -0.21
CLRN1-204ENST00000468836 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 ALYREFQ86V81 257 aaKnown RBP13.75□□□□□ -0.21
CLRN1-204ENST00000468836 DDX42Q86XP3 938 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLRN1-204ENST00000468836 PPM1KQ8N3J5 372 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 MLKLQ8NB16 471 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 ATP2A3Q93084 1043 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 LRRC3BQ96PB8 259 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 SLC22A12Q96S37 553 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 SMOQ99835 787 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 ARID3AQ99856 593 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
CLRN1-204ENST00000468836 TMEM30AQ9NV96 361 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 SMPD4Q9NXE4 827 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 CPQQ9Y646 472 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 TRIOO75962 3097 aa13.75□□□□□ -0.21
CLRN1-204ENST00000468836 DOCK6Q96HP0 2047 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 P4HA2O15460 535 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 NFATC1O95644 943 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 AFPP02771 609 aaKnown RBP13.74□□□□□ -0.21
CLRN1-204ENST00000468836 CD19P15391 556 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 ACO1P21399 889 aaKnown RBP13.74□□□□□ -0.21
CLRN1-204ENST00000468836 RPS9P46781 194 aaKnown RBP13.74□□□□□ -0.21
CLRN1-204ENST00000468836 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
CLRN1-204ENST00000468836 HECTD3Q5T447 861 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 CLEC20AQ6ZU45 233 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 SCAMP5Q8TAC9 235 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 OSCP1Q8WVF1 389 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 TATDN2Q93075 761 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 IER2Q9BTL4 223 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 LMAN1LQ9HAT1 526 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 CSNK1G1Q9HCP0 422 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 PNPLA8Q9NP80 782 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 GMIPQ9P107 970 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 GCNT4Q9P109 453 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 DLGAP2Q9P1A6 1054 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 CHORDC1Q9UHD1 332 aaPredicted RBP13.74□□□□□ -0.21
CLRN1-204ENST00000468836 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 WNT6Q9Y6F9 365 aa13.74□□□□□ -0.21
CLRN1-204ENST00000468836 LEFTY2O00292 366 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 SLC9A3R1O14745 358 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-204ENST00000468836 TNFRSF10BO14763 440 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 BEST1O76090 585 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 OAS1P00973 400 aaKnown RBP13.73□□□□□ -0.21
CLRN1-204ENST00000468836 MRE11P49959 708 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 SLC7A9P82251 487 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 KCNH2Q12809 1159 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 GRSF1Q12849 480 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLRN1-204ENST00000468836 PON2Q15165 354 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 SGO2Q562F6 1265 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 DGKKQ5KSL6 1271 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
CLRN1-204ENST00000468836 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 CLDN23Q96B33 292 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 FAM83CQ9BQN1 747 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms