RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 PSMC3P17980 439 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 DHX40Q8IX18 779 aaKnown RBP21.16■□□□□ 0.98
NPHP4-206ENST00000468253 AOPEPQ8N6M6 819 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 CELF5Q8N6W0 485 aaKnown RBP21.16■□□□□ 0.98
NPHP4-206ENST00000468253 MAB21L3Q8N8X9 362 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 RBBP8NLQ8NC74 664 aaPredicted RBP21.16■□□□□ 0.98
NPHP4-206ENST00000468253 SHC3Q92529 594 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 KXD1Q9BQD3 176 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 PLA2G2FQ9BZM2 168 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 VPS16Q9H269 839 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 PLCB1Q9NQ66 1216 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 TRPV5Q9NQA5 729 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 TAB2Q9NYJ8 693 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 HESX1Q9UBX0 185 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 SCML2Q9UQR0 700 aa21.16■□□□□ 0.98
NPHP4-206ENST00000468253 HEPACAM2A8MVW5 462 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 PES1O00541 588 aaKnown RBP21.15■□□□□ 0.98
NPHP4-206ENST00000468253 ZDHHC11BP0C7U3 371 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 RFX1P22670 979 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 AVPR1AP37288 418 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 VIPR2P41587 438 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 KIF11P52732 1056 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 COPB1P53618 953 aaKnown RBP21.15■□□□□ 0.98
NPHP4-206ENST00000468253 GPC5P78333 572 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 PFKPQ01813 784 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 IQCB1Q15051 598 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 MEA1Q16626 185 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 PKDCCQ504Y2 493 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 FKBP15Q5T1M5 1219 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 KLHDC7AQ5VTJ3 777 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 FBXO32Q969P5 355 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 ASIC4Q96FT7 647 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 TRMT61BQ9BVS5 477 aaKnown RBP21.15■□□□□ 0.98
NPHP4-206ENST00000468253 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 CHORDC1Q9UHD1 332 aaPredicted RBP21.15■□□□□ 0.98
NPHP4-206ENST00000468253 DNAJC12Q9UKB3 198 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 TSPAN16Q9UKR8 245 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 DAAM1Q9Y4D1 1078 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 USP3Q9Y6I4 520 aa21.15■□□□□ 0.98
NPHP4-206ENST00000468253 TRAV19A0A0A6YYK7 116 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 TMEM221A6NGB7 291 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 M0R296 226 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 DPYSL4O14531 572 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 XPO1O14980 1071 aaKnown RBP21.14■□□□□ 0.97
NPHP4-206ENST00000468253 USP17L7P0C7H9 530 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 HDCP19113 662 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 BCAT1P54687 386 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 FCHO2Q0JRZ9 810 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 ZSCAN23Q3MJ62 389 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 RAB41Q5JT25 222 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 TMEM31Q5JXX7 168 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 VITQ6UXI7 678 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 TTC30AQ86WT1 665 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 KIAA1958Q8N8K9 716 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 TFAP2BQ92481 460 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 KIF9Q9HAQ2 790 aa21.14■□□□□ 0.97
NPHP4-206ENST00000468253 BECN2A8MW95 431 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 NARSO43776 548 aaKnown RBP21.13■□□□□ 0.97
NPHP4-206ENST00000468253 SETSIPP0DME0 302 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 KRT5P13647 590 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 TCF3P15923 654 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 TUBP50607 506 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 BST2Q10589 180 aaKnown RBP21.13■□□□□ 0.97
NPHP4-206ENST00000468253 NFKBIBQ15653 356 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 GJB7Q6PEY0 223 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 APTXQ7Z2E3 356 aaKnown RBP21.13■□□□□ 0.97
NPHP4-206ENST00000468253 ZNF276Q8N554 614 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 KCTD13Q8WZ19 329 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 IRF7Q92985 503 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 NAA15Q9BXJ9 866 aaKnown RBP21.13■□□□□ 0.97
NPHP4-206ENST00000468253 C11orf16Q9NQ32 467 aa21.13■□□□□ 0.97
NPHP4-206ENST00000468253 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.13■□□□□ 0.97
NPHP4-206ENST00000468253 LGALS16A8MUM7 142 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 PRR33A8MZF0 331 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 FOXN3O00409 490 aaPredicted RBP21.12■□□□□ 0.97
NPHP4-206ENST00000468253 CHADO15335 359 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 MED7O43513 233 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 PSEN1P49768 467 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 MLLT6P55198 1093 aaPredicted RBP21.12■□□□□ 0.97
NPHP4-206ENST00000468253 BPIFB4P59827 614 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 SLC7A9P82251 487 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 APBA1Q02410 837 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 PDE4CQ08493 712 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 ARHGAP44Q17R89 818 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 GOLGA7BQ2TAP0 167 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 HECTD3Q5T447 861 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 CCDC186Q7Z3E2 898 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 PIGZQ86VD9 579 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 ST13P5Q8NFI4 369 aaPredicted RBP21.12■□□□□ 0.97
NPHP4-206ENST00000468253 SLC35F5Q8WV83 523 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 USP13Q92995 863 aaPredicted RBP21.12■□□□□ 0.97
NPHP4-206ENST00000468253 RSPRY1Q96DX4 576 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 LRRC3BQ96PB8 259 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 CYP2S1Q96SQ9 504 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 ZSWIM1Q9BR11 485 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 STK33Q9BYT3 514 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 SMOC2Q9H3U7 446 aa21.12■□□□□ 0.97
NPHP4-206ENST00000468253 TLR8Q9NR97 1041 aaKnown RBP21.12■□□□□ 0.97
NPHP4-206ENST00000468253 THG1LQ9NWX6 298 aaKnown RBP21.12■□□□□ 0.97
NPHP4-206ENST00000468253 ARHGAP26Q9UNA1 814 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms