RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 OVCA2Q8WZ82 227 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 SLITRK1Q96PX8 696 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 IMPG2Q9BZV3 1241 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 DNAI2Q9GZS0 605 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 RMND1Q9NWS8 449 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 HELZP42694 1942 aaKnown RBP11.03□□□□□ -0.64
SSR3-205ENST00000467789 FRYLO94915 3013 aa11.03□□□□□ -0.64
SSR3-205ENST00000467789 F8VP50 259 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 LILRB5O75023 590 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 RTN3O95197 1032 aaPredicted RBP11.02□□□□□ -0.65
SSR3-205ENST00000467789 ASS1P00966 412 aaKnown RBP11.02□□□□□ -0.65
SSR3-205ENST00000467789 KRT13P13646 458 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 HDCP19113 662 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 PSMC2P35998 433 aaKnown RBP11.02□□□□□ -0.65
SSR3-205ENST00000467789 CXCL12P48061 93 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 VAMP7P51809 220 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.65
SSR3-205ENST00000467789 USP4Q13107 963 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 NR1H3Q13133 447 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 CCINQ13939 588 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 MTF1Q14872 753 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 EDRF1Q3B7T1 1238 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 RUBCNQ92622 972 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 ATP2A3Q93084 1043 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 ZFYVE19Q96K21 471 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 GSDMAQ96QA5 445 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 SMG9Q9H0W8 520 aaKnown RBP11.02□□□□□ -0.65
SSR3-205ENST00000467789 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 COMMD8Q9NX08 183 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 GCNT4Q9P109 453 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
SSR3-205ENST00000467789 ARHGAP26Q9UNA1 814 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 CCL26Q9Y258 94 aa11.02□□□□□ -0.65
SSR3-205ENST00000467789 EP300Q09472 2414 aaPredicted RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 SPTBN4Q9H254 2564 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 OTOGLQ3ZCN5 2332 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 TRDMT1O14717 391 aaKnown RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 STX10O60499 249 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 ATG13O75143 517 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CLSTN1O94985 981 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 VNN1O95497 513 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 HOXA6P31267 233 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 GTF2H1P32780 548 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CNR2P34972 360 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 SOX9P48436 509 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 DLG4P78352 724 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 TNK2Q07912 1038 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 GRSF1Q12849 480 aaKnown RBP eCLIP11.01□□□□□ -0.65
SSR3-205ENST00000467789 ADAM9Q13443 819 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 ZNF77Q15935 545 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 COBLL1Q53SF7 1204 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 TXNDC11Q6PKC3 985 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 FAM186BQ8IYM0 893 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 NUP93Q8N1F7 819 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CRYBG2Q8N1P7 616 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CPA6Q8N4T0 437 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 GPR161Q8N6U8 529 aaKnown RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CCDC150Q8NCX0 1101 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 STKLD1Q8NE28 680 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CCDC26Q8TAB7 109 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 OSCP1Q8WVF1 389 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 SMARCD1Q96GM5 515 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CHAMP1Q96JM3 812 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 B3GNT5Q9BYG0 378 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 EPC1Q9H2F5 836 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 FAM124BQ9H5Z6 455 aaPredicted RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 SMYD3Q9H7B4 428 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 CYP3A43Q9HB55 503 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 DMAP1Q9NPF5 467 aaPredicted RBP11.01□□□□□ -0.65
SSR3-205ENST00000467789 HPS4Q9NQG7 708 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
SSR3-205ENST00000467789 C2orf78A6NCI8 922 aa11□□□□□ -0.65
SSR3-205ENST00000467789 ZNF840PA6NDX5 716 aa11□□□□□ -0.65
SSR3-205ENST00000467789 AKAP3O75969 853 aa11□□□□□ -0.65
SSR3-205ENST00000467789 SMC2O95347 1197 aa11□□□□□ -0.65
SSR3-205ENST00000467789 NFATC1O95644 943 aa11□□□□□ -0.65
SSR3-205ENST00000467789 OLFM2O95897 454 aa11□□□□□ -0.65
SSR3-205ENST00000467789 TDGF1P13385 188 aa11□□□□□ -0.65
SSR3-205ENST00000467789 DRD1P21728 446 aa11□□□□□ -0.65
SSR3-205ENST00000467789 YWHAQP27348 245 aa11□□□□□ -0.65
SSR3-205ENST00000467789 PIK3CAP42336 1068 aa11□□□□□ -0.65
SSR3-205ENST00000467789 IFNAR2P48551 515 aa11□□□□□ -0.65
SSR3-205ENST00000467789 SLC7A9P82251 487 aa11□□□□□ -0.65
SSR3-205ENST00000467789 PON2Q15165 354 aa11□□□□□ -0.65
SSR3-205ENST00000467789 ZCWPW2Q504Y3 356 aa11□□□□□ -0.65
SSR3-205ENST00000467789 TMEM196Q5HYL7 178 aa11□□□□□ -0.65
SSR3-205ENST00000467789 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
SSR3-205ENST00000467789 FAM35AQ86V20 835 aa11□□□□□ -0.65
SSR3-205ENST00000467789 DDX42Q86XP3 938 aaKnown RBP eCLIP11□□□□□ -0.65
SSR3-205ENST00000467789 ELOA2Q8IYF1 753 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms