RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TMEM60Q9H2L4 133 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 MYO18AQ92614 2054 aaKnown RBP11□□□□□ -0.65
HDAC3-203ENST00000467533 A0A0A0MRY4 1105 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 A0A1W2PQF6 199 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 NFICP08651 508 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 NCAM1P13591 858 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 C6P13671 934 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 JUPP14923 745 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 CYP2F1P24903 491 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 GRK6P43250 576 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 ZXDBP98169 803 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 BNC1Q01954 994 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 RHDQ02161 417 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 TLE3Q04726 772 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
HDAC3-203ENST00000467533 LY6DQ14210 128 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 PTPRNQ16849 979 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 WSCD1Q658N2 575 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 JADE1Q6IE81 842 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 SDE2Q6IQ49 451 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 PRICKLE2Q7Z3G6 844 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 ADGRG2Q8IZP9 1017 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 PHTF2Q8N3S3 785 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 KCNV2Q8TDN2 545 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
HDAC3-203ENST00000467533 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
HDAC3-203ENST00000467533 SLC6A17Q9H1V8 727 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 RPF1Q9H9Y2 349 aaKnown RBP11□□□□□ -0.65
HDAC3-203ENST00000467533 FTSJ1Q9UET6 329 aa11□□□□□ -0.65
HDAC3-203ENST00000467533 TP53BP1Q12888 1972 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 A0A1B0GVT2 93 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 PIRO00625 290 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 BCAT2O15382 392 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 DTNBO60941 627 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 PSMA5P28066 241 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 CD6P30203 668 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 MCM7P33993 719 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 TAF6P49848 677 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 CLDN6P56747 220 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 ENOX2Q16206 610 aaKnown RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 DCAF12L1Q5VU92 463 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 BTBD8Q5XKL5 378 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 EGFLAMQ63HQ2 1017 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 RHBDF2Q6PJF5 856 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 ZPBP2Q6X784 338 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 DBX2Q6ZNG2 339 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 SCN4BQ8IWT1 228 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 SPACA3Q8IXA5 215 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 CHPFQ8IZ52 775 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 DAW1Q8N136 415 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 LEO1Q8WVC0 666 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 DNASE2BQ8WZ79 361 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 KCNB2Q92953 911 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 TNFRSF25Q93038 417 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 WBP1Q96G27 269 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 ZNF274Q96GC6 653 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-203ENST00000467533 LGMNQ99538 433 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 GPR174Q9BXC1 333 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 HAPLN2Q9GZV7 340 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 SMPD4Q9NXE4 827 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 GMIPQ9P107 970 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 CPQQ9Y646 472 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 MYLKQ15746 1914 aa10.99□□□□□ -0.65
HDAC3-203ENST00000467533 MGAQ8IWI9 3026 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 MUTP22033 750 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 CSRP3P50461 194 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 GAD2Q05329 585 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 TMEM132DQ14C87 1099 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 SF3A1Q15459 793 aaKnown RBP10.98□□□□□ -0.65
HDAC3-203ENST00000467533 ECM1Q16610 540 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 KYAT1Q16773 422 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 INAVAQ3KP66 663 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 LY6G5CQ5SRR4 150 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 MIB1Q86YT6 1006 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 TERB1Q8NA31 727 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 FGF11Q92914 225 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 TOE1Q96GM8 510 aaKnown RBP10.98□□□□□ -0.65
HDAC3-203ENST00000467533 TMEM176AQ96HP8 235 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 TSPAN18Q96SJ8 248 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 ACOX2Q99424 681 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 ABCB6Q9NP58 842 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 DDX19AQ9NUU7 478 aaKnown RBP10.98□□□□□ -0.65
HDAC3-203ENST00000467533 CFAP97Q9P2B7 532 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 DEC1Q9P2X7 70 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 KIAA1024Q9UPX6 916 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 NFE2L3Q9Y4A8 694 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 RAD54BQ9Y620 910 aa10.98□□□□□ -0.65
HDAC3-203ENST00000467533 ANO9A1A5B4 782 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 BRINP1O60477 761 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 TULP3O75386 442 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 PFKLP17858 780 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 ACAT1P24752 427 aaKnown RBP10.97□□□□□ -0.65
HDAC3-203ENST00000467533 ACTN2P35609 894 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 CCT8P50990 548 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 TMPRSS3P57727 454 aa10.97□□□□□ -0.65
HDAC3-203ENST00000467533 SLC7A9P82251 487 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms