RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TXNP10599 105 aaKnown RBP4.88□□□□□ -1.63
SMC4-208ENST00000467468 BMP5P22003 454 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 BDNFP23560 247 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 PHKA1P46020 1223 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 MRPS35P82673 323 aaKnown RBP4.88□□□□□ -1.63
SMC4-208ENST00000467468 PTK2BQ14289 1009 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 SPARCL1Q14515 664 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 POSTNQ15063 836 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 SLC4A8Q2Y0W8 1093 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 WDR78Q5VTH9 848 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 MZT2AQ6P582 158 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 GALNT15Q8N3T1 639 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 NME8Q8N427 588 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 OR56A3Q8NH54 315 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 CAGE1Q8TC20 777 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 FAM71BQ8TC56 605 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 UBXN10Q96LJ8 280 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 TRIB1Q96RU8 372 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 MAGEB5Q9BZ81 275 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 RIOX1Q9H6W3 641 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 ITM2CQ9NQX7 267 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 LRFN1Q9P244 771 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 SWAP70Q9UH65 585 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 PLEKHM1Q9Y4G2 1056 aa4.88□□□□□ -1.63
SMC4-208ENST00000467468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.88□□□□□ -1.631e-8■■■■■ 54.3
SMC4-208ENST00000467468 ZAR1LA6NP61 321 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 POLRMTO00411 1230 aaKnown RBP4.87□□□□□ -1.63
SMC4-208ENST00000467468 IRAK2O43187 625 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 ITGA5P08648 1049 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 GABRB3P28472 473 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 MAN1A1P33908 653 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 SLC11A2P49281 568 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 ZNF135P52742 658 aaPredicted RBP4.87□□□□□ -1.63
SMC4-208ENST00000467468 ITGA8P53708 1063 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 COL10A1Q03692 680 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 DYRK1AQ13627 763 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 HLXQ14774 488 aaPredicted RBP4.87□□□□□ -1.63
SMC4-208ENST00000467468 RAB30Q15771 203 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 DCAF12L1Q5VU92 463 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 TANGO2Q6ICL3 276 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 OLFML1Q6UWY5 402 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 MICALCLQ6ZW33 695 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 DNAJC10Q8IXB1 793 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 YAF2Q8IY57 180 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 DNAJC5GQ8N7S2 189 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 Q8NA96 180 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 PCSK9Q8NBP7 692 aaKnown RBP4.87□□□□□ -1.63
SMC4-208ENST00000467468 NAXEQ8NCW5 288 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
SMC4-208ENST00000467468 GPR150Q8NGU9 434 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 ACTRT2Q8TDY3 377 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 PPM1MQ96MI6 270 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 CRAMP1Q96RY5 1269 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 SORBS1Q9BX66 1292 aaKnown RBP4.87□□□□□ -1.63
SMC4-208ENST00000467468 ZHX3Q9H4I2 956 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 CTTNBP2NLQ9P2B4 639 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 ITGB1BP2Q9UKP3 347 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 INSL6Q9Y581 213 aa4.87□□□□□ -1.63
SMC4-208ENST00000467468 AQP12BA6NM10 295 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 TMEM233B4DJY2 109 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 TRIM38O00635 465 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 EPB41L2O43491 1005 aaKnown RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 KCNQ3O43525 872 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 SUN1O94901 812 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 ZFPL1O95159 310 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 NDST3O95803 873 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 A1BGP04217 495 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 CENPBP07199 599 aaPredicted RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 GRPP07492 148 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 IL1R2P27930 398 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 ADRA1BP35368 520 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 MPLP40238 635 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 UCP3P55916 312 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 FOXI1Q12951 378 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 SF3B3Q15393 1217 aaKnown RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 NBPF8Q3BBV2 869 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 CD300EQ496F6 205 aaPredicted RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 INTS11Q5TA45 600 aaKnown RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 ARL6IP4Q66PJ3 421 aaKnown RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 JMJD6Q6NYC1 403 aaPredicted RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 USP17L6PQ6QN14 398 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 KRT28Q7Z3Y7 464 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 ADGRG5Q8IZF4 528 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 GLIS1Q8NBF1 620 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 B3GALNT2Q8NCR0 500 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 STT3BQ8TCJ2 826 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 IPO4Q8TEX9 1081 aaKnown RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 USP13Q92995 863 aaPredicted RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 SPSB4Q96A44 273 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 EID2BQ96D98 161 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 LRRC46Q96FV0 321 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 EIF2AK1Q9BQI3 630 aaKnown RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 DUSP26Q9BV47 211 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 STK31Q9BXU1 1019 aa4.86□□□□□ -1.63
SMC4-208ENST00000467468 TINAGL1Q9GZM7 467 aaPredicted RBP4.86□□□□□ -1.63
SMC4-208ENST00000467468 RGL1Q9NZL6 768 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms