RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 MTF1Q14872 753 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 PON2Q15165 354 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 NFIL3Q16649 462 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 TPD52L1Q16890 204 aaPredicted RBP13.12□□□□□ -0.31
CRAT-209ENST00000467343 EDRF1Q3B7T1 1238 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 ZCWPW2Q504Y3 356 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 LIMS2Q7Z4I7 341 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 TMEM150AQ86TG1 271 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 JAKMIP2Q96AA8 810 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 SMARCD1Q96GM5 515 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 CYP2S1Q96SQ9 504 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 B3GNT5Q9BYG0 378 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 VRTNQ9H8Y1 702 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 DUS2Q9NX74 493 aaKnown RBP13.12□□□□□ -0.31
CRAT-209ENST00000467343 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
CRAT-209ENST00000467343 OBSL1O75147 1896 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 BICDL2A1A5D9 508 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 TADA3O75528 432 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
CRAT-209ENST00000467343 ADCY5O95622 1261 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 CCDC130P13994 396 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 YWHAQP27348 245 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 WEE1P30291 646 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 CTHP32929 405 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 RPS9P46781 194 aaKnown RBP13.11□□□□□ -0.31
CRAT-209ENST00000467343 MXI1P50539 228 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 CLDN10P78369 228 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 RUNX3Q13761 415 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 KRT39Q6A163 491 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 TSSK4Q6SA08 328 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 RALGPS2Q86X27 583 aaPredicted RBP13.11□□□□□ -0.31
CRAT-209ENST00000467343 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 C8orf48Q96LL4 319 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 MYRFLQ96LU7 910 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 SDCBP2Q9H190 292 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
CRAT-209ENST00000467343 RBM12Q9NTZ6 932 aaKnown RBP13.11□□□□□ -0.31
CRAT-209ENST00000467343 NME7Q9Y5B8 376 aa13.11□□□□□ -0.31
CRAT-209ENST00000467343 USP34Q70CQ2 3546 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 DENND4CQ5VZ89 1909 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 PRR23AA6NEV1 266 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
CRAT-209ENST00000467343 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 MBL2P11226 248 aaPredicted RBP13.1□□□□□ -0.31
CRAT-209ENST00000467343 ARSAP15289 507 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 PPP3CCP48454 512 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 CCR3P51677 355 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 ZNF75DP51815 510 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 USP46P62068 366 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 FANCCQ00597 558 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
CRAT-209ENST00000467343 TAF10Q12962 218 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 MTAPQ13126 283 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 NR1H3Q13133 447 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 ZNF268Q14587 947 aaPredicted RBP13.1□□□□□ -0.31
CRAT-209ENST00000467343 PDGFRLQ15198 375 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 ASCL5Q7RTU5 278 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 PDZD8Q8NEN9 1154 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 SLC2A14Q8TDB8 520 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 HMGXB4Q9UGU5 601 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 WNT6Q9Y6F9 365 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 MYH10P35580 1976 aa13.1□□□□□ -0.31
CRAT-209ENST00000467343 KIF26AQ9ULI4 1882 aaPredicted RBP13.1□□□□□ -0.31
CRAT-209ENST00000467343 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 KCNJ18B7U540 433 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 ARNTLO00327 626 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
CRAT-209ENST00000467343 GTF2H1P32780 548 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 ASPAP45381 313 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 SLC5A3P53794 718 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 CACNA2D1P54289 1103 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
CRAT-209ENST00000467343 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
CRAT-209ENST00000467343 KCNJ12Q14500 433 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms