RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DCAF12L1Q5VU92 463 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 DCUN1D2Q6PH85 259 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 RNF19BQ6ZMZ0 732 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 SPATA2LQ8IUW3 424 aaPredicted RBP13.67□□□□□ -0.22
COL4A1-202ENST00000467182 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 EMC1Q8N766 993 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
COL4A1-202ENST00000467182 NDRG1Q92597 394 aaKnown RBP13.67□□□□□ -0.22
COL4A1-202ENST00000467182 KRT35Q92764 455 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
COL4A1-202ENST00000467182 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 ZBED2Q9BTP6 218 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 CRISPLD1Q9H336 500 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 PNPLA8Q9NP80 782 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
COL4A1-202ENST00000467182 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 PLXNA3P51805 1871 aa13.67□□□□□ -0.22
COL4A1-202ENST00000467182 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 WDR27A2RRH5 827 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 F8VP50 259 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 DPYSL4O14531 572 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ZNF185O15231 689 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 LILRB3O75022 631 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 PPM1AP35813 382 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-202ENST00000467182 MAGEA11P43364 429 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 MARCKSL1P49006 195 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 GLUD2P49448 558 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 SLC8A3P57103 927 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 DAOAP59103 153 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 TAS2R40P59535 323 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 MRPS5P82675 430 aaKnown RBP13.66□□□□□ -0.22
COL4A1-202ENST00000467182 SLC26A9Q7LBE3 791 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ARCQ7LC44 396 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 CREG2Q8IUH2 290 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 SCML4Q8N228 414 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 TTC9BQ8N6N2 239 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ATAD1Q8NBU5 361 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 FBXO22Q8NEZ5 403 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ALG3Q92685 438 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 PGLYRP2Q96PD5 576 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 PSMB7Q99436 277 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 C11orf84Q9BUA3 381 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ULBP1Q9BZM6 244 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 LRRC4Q9HBW1 653 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 AAASQ9NRG9 546 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 ABI2Q9NYB9 513 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-202ENST00000467182 LCMT1Q9UIC8 334 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 PCDHB5Q9Y5E4 795 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 CDY1Q9Y6F8 540 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 USP3Q9Y6I4 520 aa13.66□□□□□ -0.22
COL4A1-202ENST00000467182 LINC01553A4QN01 128 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 MIF4GDA9UHW6 222 aaKnown RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 CES2O00748 559 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 TLL1O43897 1013 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 GRAP2O75791 330 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 FGF18O76093 207 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 TCF4P15884 667 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 TCP1P17987 556 aaKnown RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 GPD1P21695 349 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 CXCR5P32302 372 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 CTNNA1P35221 906 aaKnown RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 GPR15P49685 360 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 ZNF143P52747 638 aaPredicted RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 ROR1Q01973 937 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 SHHQ15465 462 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 CCDC14Q49A88 953 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 PM20D1Q6GTS8 502 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 FAM109BQ6ICB4 259 aaPredicted RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 HFE2Q6ZVN8 426 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 GPR65Q8IYL9 337 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 LRRN4CLQ8ND94 238 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 UBE2Q2Q8WVN8 375 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 RXFP2Q8WXD0 754 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 C8orf48Q96LL4 319 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 ADAM33Q9BZ11 813 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
COL4A1-202ENST00000467182 ASNSD1Q9NWL6 643 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 PCDHA3Q9Y5H8 950 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
COL4A1-202ENST00000467182 PDE2AO00408 941 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 SPOPO43791 374 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 ABLIM3O94929 683 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 FBXO21O94952 628 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 FYNP06241 537 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 CPB1P15086 417 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 PSMA2P25787 234 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms