RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 JAMLQ86YT9 394 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM126BQ8IXS8 530 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 KRT222Q8N1A0 295 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 ARFGAP1Q8N6T3 406 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 B3GALNT2Q8NCR0 500 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 KCTD13Q8WZ19 329 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 SLITRK1Q96PX8 696 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 DUSP16Q9BY84 665 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM129AQ9BZQ8 928 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 ELAC1Q9H777 363 aaKnown RBP10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 ST7Q9NRC1 585 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM49BQ9NUQ9 324 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 DSEQ9UL01 958 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 CDH9Q9ULB4 789 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 OGDHLQ9ULD0 1010 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 PTPN22Q9Y2R2 807 aa10.02□□□□□ -0.81
APOBEC1-202ENST00000467171 TCRBV7S2A1N4TA0A589 114 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 ZSCAN5CA6NGD5 496 aaPredicted RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 M0QZQ0 153 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 PAPSS1O43252 624 aaPredicted RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 RNF8O76064 485 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 TJP3O95049 919 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 KRT1P04264 644 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 RALAP11233 206 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 CCDC130P13994 396 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 PTPN1P18031 435 aaKnown RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 PCSK1P29120 753 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 ECHS1P30084 290 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 SSR1P43307 286 aaKnown RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC8A3P57103 927 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 GPS2Q13227 327 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 CCNG2Q16589 344 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 TTC27Q6P3X3 843 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 CCDC137Q6PK04 289 aaKnown RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 GLB1LQ6UWU2 654 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 CD300LGQ6UXG3 332 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 DSTYKQ6XUX3 929 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 SND1Q7KZF4 910 aaKnown RBP eCLIP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 METTL3Q86U44 580 aaKnown RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 RTN4RL1Q86UN2 441 aaPredicted RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 VSIG1Q86XK7 387 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 FUKQ8N0W3 1084 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 CMASQ8NFW8 434 aaPredicted RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC2A14Q8TDB8 520 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 RSPH1Q8WYR4 309 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 TBCBQ99426 244 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 UNC93B1Q9H1C4 597 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 DDX43Q9NXZ2 648 aaKnown RBP10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 KANSL3Q9P2N6 904 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 NFU1Q9UMS0 254 aa10.01□□□□□ -0.81
APOBEC1-202ENST00000467171 hCG_1818297A0A087WSY0 165 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 ESYT3A0FGR9 886 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 C3orf70A6NLC5 250 aaPredicted RBP10□□□□□ -0.81
APOBEC1-202ENST00000467171 TMEM189-UBE2V1I3L0A0 370 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 TULP2O00295 520 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 HCRTO43612 131 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
APOBEC1-202ENST00000467171 ECEL1O95672 775 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 TRUB2O95900 331 aaKnown RBP10□□□□□ -0.81
APOBEC1-202ENST00000467171 ADH1BP00325 375 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 ODC1P11926 461 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 TCF4P15884 667 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 PDGFRAP16234 1089 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 NPR3P17342 541 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 DESP17661 470 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 TYMPP19971 482 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 ADORA2BP29275 332 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 MIPP30301 263 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 HSPA9P38646 679 aaKnown RBP10□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC19A1P41440 591 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 CDKN2BP42772 138 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 PTPN9P43378 593 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 RGS7P49802 495 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 HTRA3P83110 453 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 DSC1Q08554 894 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 SMC1AQ14683 1233 aaKnown RBP10□□□□□ -0.81
APOBEC1-202ENST00000467171 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 BOLA3Q53S33 107 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 SPDYCQ5MJ68 293 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 DAB2IPQ5VWQ8 1189 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 ALS2CLQ60I27 953 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 MFSD7Q6UXD7 560 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 PAQR9Q6ZVX9 377 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 ADAT2Q7Z6V5 191 aaKnown RBP10□□□□□ -0.81
APOBEC1-202ENST00000467171 CCDC50Q8IVM0 306 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 CCDC105Q8IYK2 499 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 EMC1Q8N766 993 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 C3orf58Q8NDZ4 430 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 ATL2Q8NHH9 583 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 MYCBPAPQ8TBZ2 947 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 SH3TC2Q8TF17 1288 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 GRK7Q8WTQ7 553 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 IFT81Q8WYA0 676 aa10□□□□□ -0.81
APOBEC1-202ENST00000467171 RAPGEF5Q92565 580 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms