RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 DPH6Q7L8W6 267 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 UBA3Q8TBC4 463 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 SLC7A6OSQ96CW6 309 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-212ENST00000466410 ALG13Q9NP73 1137 aaKnown RBP20.24■□□□□ 0.83
LIMS2-212ENST00000466410 NUMBLQ9Y6R0 609 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 PTPRFP10586 1907 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 LTBP3Q9NS15 1303 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 DIAPH2O60879 1101 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 GPD2P43304 727 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 NLRP9Q7RTR0 991 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 PLPPR4Q7Z2D5 763 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 CCDC125Q86Z20 511 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 FBXO41Q8TF61 875 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 COPS5Q92905 334 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 TMEM176AQ96HP8 235 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 ADPGKQ9BRR6 497 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.24■□□□□ 0.83
LIMS2-212ENST00000466410 TNFSF13BQ9Y275 285 aa20.24■□□□□ 0.83
LIMS2-212ENST00000466410 IL18RAPO95256 599 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 GABRB2P47870 512 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 OVGP1Q12889 678 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 PARP6Q2NL67 630 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 TRNP1Q6NT89 227 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 DARS2Q6PI48 645 aaKnown RBP20.23■□□□□ 0.83
LIMS2-212ENST00000466410 PTPRN2Q92932 1015 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 SPATA33Q96N06 139 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 ASCC2Q9H1I8 757 aaPredicted RBP20.23■□□□□ 0.83
LIMS2-212ENST00000466410 RSAD1Q9HA92 442 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.23■□□□□ 0.83
LIMS2-212ENST00000466410 DCTN4Q9UJW0 460 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 CDH6P55285 790 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 TAF1BQ53T94 588 aaPredicted RBP20.23■□□□□ 0.83
LIMS2-212ENST00000466410 GADL1Q6ZQY3 521 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 CYP4V2Q6ZWL3 525 aaPredicted RBP20.23■□□□□ 0.83
LIMS2-212ENST00000466410 AGGF1Q8N302 714 aaeCLIP20.23■□□□□ 0.83
LIMS2-212ENST00000466410 CXorf38Q8TB03 319 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 FGD4Q96M96 766 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 KANSL3Q9P2N6 904 aa20.23■□□□□ 0.83
LIMS2-212ENST00000466410 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 LRRC37A2A6NM11 1700 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 TM9SF1O15321 606 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 STAG3L1P0CL83 205 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 ROR1Q01973 937 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 EXOC8Q8IYI6 725 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 RFWD2Q8NHY2 731 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 PIWIL1Q96J94 861 aaKnown RBP20.22■□□□□ 0.83
LIMS2-212ENST00000466410 CYTH2Q99418 400 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 ASNSD1Q9NWL6 643 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 TCRBV9S1A1TA0A576 114 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 C2CD2LO14523 706 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 AVILO75366 819 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 ZNF143P52747 638 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-212ENST00000466410 NOMO1Q15155 1222 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 C15orf59Q2T9L4 293 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-212ENST00000466410 FYB2Q5VWT5 728 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 MAP1SQ66K74 1059 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-212ENST00000466410 MTDHQ86UE4 582 aaKnown RBP20.22■□□□□ 0.83
LIMS2-212ENST00000466410 INPP5DQ92835 1189 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 HEXIM2Q96MH2 286 aaKnown RBP20.22■□□□□ 0.83
LIMS2-212ENST00000466410 PPP1R16BQ96T49 567 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 TBC1D10AQ9BXI6 508 aa20.22■□□□□ 0.83
LIMS2-212ENST00000466410 KBTBD13C9JR72 458 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 SMAPO00193 183 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 ENDOD1O94919 500 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 MT-ND3P03897 115 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 ACAP1Q15027 740 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 KBTBD12Q3ZCT8 623 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 SLC45A4Q5BKX6 768 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 ALKBH8Q96BT7 664 aaKnown RBP20.21■□□□□ 0.83
LIMS2-212ENST00000466410 SERAC1Q96JX3 654 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 VPS11Q9H270 941 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 MCM3APO60318 1980 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 ATP2A2P16615 1042 aaKnown RBP20.21■□□□□ 0.83
LIMS2-212ENST00000466410 PCK1P35558 622 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 CLNS1AP54105 237 aaKnown RBP20.21■□□□□ 0.83
LIMS2-212ENST00000466410 PTK7Q13308 1070 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 CDO1Q16878 200 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 FBXO16Q8IX29 292 aaPredicted RBP20.21■□□□□ 0.83
LIMS2-212ENST00000466410 KIRREL3Q8IZU9 778 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 RSRC1Q96IZ7 334 aaKnown RBP20.21■□□□□ 0.83
LIMS2-212ENST00000466410 MANSC1Q9H8J5 431 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 ZFP69BQ9UJL9 534 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 TEX264Q9Y6I9 313 aa20.21■□□□□ 0.83
LIMS2-212ENST00000466410 GRAP2O75791 330 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 WFS1O76024 890 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 CYP3A5P20815 502 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 EPHB2P29323 1055 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 STIP1P31948 543 aaKnown RBP20.2■□□□□ 0.82
LIMS2-212ENST00000466410 FAAP100Q0VG06 881 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 KCNJ11Q14654 390 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 FAM13CQ8NE31 585 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 RXFP2Q8WXD0 754 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 KAT6AQ92794 2004 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 CNPY3Q9BT09 278 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 NKX1-2Q9UD57 310 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-212ENST00000466410 H7C0C1 242 aa20.2■□□□□ 0.82
LIMS2-212ENST00000466410 LPXNO60711 386 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms