RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 OVCA2Q8WZ82 227 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 IRF7Q92985 503 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 USP13Q92995 863 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-206ENST00000465877 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 HEXIM2Q96MH2 286 aaKnown RBP13.65□□□□□ -0.22
COL5A1-206ENST00000465877 SLC22A12Q96S37 553 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
COL5A1-206ENST00000465877 FAM92AA1XBS5 289 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 GTPBP10A4D1E9 387 aaKnown RBP13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 KCNJ18B7U540 433 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 HHLA1C9JL84 531 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ZNF263O14978 683 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 CHADO15335 359 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
COL5A1-206ENST00000465877 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-206ENST00000465877 AOC1P19801 751 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ACO1P21399 889 aaKnown RBP13.64□□□□□ -0.23
COL5A1-206ENST00000465877 PPP3CCP48454 512 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 PDE6CP51160 858 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 PRKCQQ04759 706 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 KCNJ12Q14500 433 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ZNF77Q15935 545 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 GOLGA7BQ2TAP0 167 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ARHGAP29Q52LW3 1261 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 SGO2Q562F6 1265 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ARHGAP17Q68EM7 881 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-206ENST00000465877 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 TMEM270Q6UE05 265 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 TPRG1Q6ZUI0 275 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 RRAGAQ7L523 313 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 TMEM105Q8N8V8 129 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 RIN3Q8TB24 985 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 KREMEN1Q96MU8 473 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 LRRC3BQ96PB8 259 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 CRACR2AQ9BSW2 395 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 DUSP16Q9BY84 665 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 HEBP1Q9NRV9 189 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 TDP1Q9NUW8 608 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 IL37Q9NZH6 218 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 RAPGEFL1Q9UHV5 662 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 TSPAN16Q9UKR8 245 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 PCDHB4Q9Y5E5 795 aa13.64□□□□□ -0.23
COL5A1-206ENST00000465877 OLFM2O95897 454 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 ABL1P00519 1130 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 CD19P15391 556 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 PFKLP17858 780 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 EEF1GP26641 437 aaKnown RBP13.63□□□□□ -0.23
COL5A1-206ENST00000465877 ZNF132P52740 706 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 BCAT1P54687 386 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 STARD6P59095 220 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 MTF1Q14872 753 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 EXOC3L4Q17RC7 722 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 MIIPQ5JXC2 388 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 PHLDB3Q6NSJ2 640 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
COL5A1-206ENST00000465877 GBP6Q6ZN66 633 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 ARL14EPQ8N8R7 260 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-206ENST00000465877 RBBP8NLQ8NC74 664 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-206ENST00000465877 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
COL5A1-206ENST00000465877 SHDQ96IW2 340 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 TUBGCP2Q9BSJ2 902 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 FOXQ1Q9C009 403 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 FBXO44Q9H4M3 255 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 TRPV5Q9NQA5 729 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 SAMSN1Q9NSI8 373 aaKnown RBP13.63□□□□□ -0.23
COL5A1-206ENST00000465877 COMMD8Q9NX08 183 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 GMIPQ9P107 970 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 ARHGAP26Q9UNA1 814 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
COL5A1-206ENST00000465877 O00370 1275 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 CYP26A1O43174 497 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 PAEPP09466 180 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 VDRP11473 427 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 CLCN5P51795 746 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 APBA1Q02410 837 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 TYRO3Q06418 890 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 VWA3BQ502W6 1294 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 SLC44A4Q53GD3 710 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 TCP11X2Q5H9J9 407 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 CDKAL1Q5VV42 579 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 PJA1Q8NG27 643 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 CSGALNACT1Q8TDX6 532 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 CYP2S1Q96SQ9 504 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 DDX23Q9BUQ8 820 aaKnown RBP13.62□□□□□ -0.23
COL5A1-206ENST00000465877 NDST4Q9H3R1 872 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 PIAS3Q9Y6X2 628 aa13.62□□□□□ -0.23
COL5A1-206ENST00000465877 KANSL1LA0AUZ9 987 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 STK25O00506 426 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 PES1O00541 588 aaKnown RBP13.61□□□□□ -0.23
COL5A1-206ENST00000465877 ZDHHC11BP0C7U3 371 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 KRT5P13647 590 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms