RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FAM160B2Q86V87 743 aa20.58■□□□□ 0.89
SDF4-205ENST00000465727 CRLF3Q8IUI8 442 aa20.58■□□□□ 0.89
SDF4-205ENST00000465727 ARID3BQ8IVW6 561 aaPredicted RBP20.58■□□□□ 0.89
SDF4-205ENST00000465727 CHMP2BQ9UQN3 213 aa20.58■□□□□ 0.89
SDF4-205ENST00000465727 PLLPQ9Y342 182 aa20.58■□□□□ 0.89
SDF4-205ENST00000465727 G3V3G9 751 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 ATP9BO43861 1147 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 TNNI1P19237 187 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 SFNP31947 248 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 IRX4P78413 519 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 UGCGQ16739 394 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 DOK7Q18PE1 504 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 HSF5Q4G112 596 aaPredicted RBP20.58■□□□□ 0.88
SDF4-205ENST00000465727 SH2D4BQ5SQS7 431 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 DCAF8Q5TAQ9 597 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 LGSNQ5TDP6 509 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 RAPH1Q70E73 1250 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 LDHDQ86WU2 507 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 CLPTM1LQ96KA5 538 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 ACAP3Q96P50 834 aa20.58■□□□□ 0.88
SDF4-205ENST00000465727 TMEM150BA6NC51 233 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 AP1G1O43747 822 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 ELK3P41970 407 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 FKBP1AP62942 108 aaKnown RBP20.57■□□□□ 0.88
SDF4-205ENST00000465727 MTMR1Q13613 665 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 ANGEL2Q5VTE6 544 aaKnown RBP20.57■□□□□ 0.88
SDF4-205ENST00000465727 TXNRD3NBQ6F5E7 133 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 FAM196AQ6ZSG2 479 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 THNSL1Q8IYQ7 743 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 KLHL4Q9C0H6 718 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 TEX264Q9Y6I9 313 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.57■□□□□ 0.88
SDF4-205ENST00000465727 A0A088AWK7 358 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 H0YCG3 227 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 OPHN1O60890 802 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 ENTPD3O75355 529 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 KRT7P08729 469 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 SNRPAP09012 282 aaKnown RBP20.57■□□□□ 0.88
SDF4-205ENST00000465727 CCNFP41002 786 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 WASHC5Q12768 1159 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 TEX44Q53QW1 395 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 SPOPLQ6IQ16 392 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 DPY19L2Q6NUT2 758 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 ZNF606Q8WXB4 792 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 HIC2Q96JB3 615 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 ZNF518BQ9C0D4 1074 aa20.57■□□□□ 0.88
SDF4-205ENST00000465727 STN1Q9H668 368 aaKnown RBP20.57■□□□□ 0.88
SDF4-205ENST00000465727 CHCHD3Q9NX63 227 aaKnown RBP20.57■□□□□ 0.88
SDF4-205ENST00000465727 TCRBV7S3A2A0A539 114 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 WDR64B1ANS9 1081 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 KBTBD13C9JR72 458 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 CCNT2O60583 730 aaKnown RBP20.56■□□□□ 0.88
SDF4-205ENST00000465727 USP1O94782 785 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 CPOXP36551 454 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 RGS2P41220 211 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 RBM5P52756 815 aaKnown RBP eCLIP20.56■□□□□ 0.888e-6■■■■□ 20.7
SDF4-205ENST00000465727 AQP5P55064 265 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 OGDHQ02218 1023 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 TAZQ16635 292 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 SPATA24Q86W54 205 aa20.56■□□□□ 0.88
SDF4-205ENST00000465727 CST8O60676 142 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 SNNO75324 88 aaPredicted RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 VNN1O95497 513 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 R3HDM1Q15032 1099 aaKnown RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 DBN1Q16643 649 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 BSNDQ8WZ55 320 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 LZICQ8WZA0 190 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 BTBD9Q96Q07 612 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 FRMD8Q9BZ67 464 aaPredicted RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 APOBEC3GQ9HC16 384 aaKnown RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 TCEAL9Q9UHQ7 104 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 HBS1LQ9Y450 684 aaKnown RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 PRR5-ARHGAP8B1AHC4 643 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 TRIM49D1C9J1S8 452 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 BIRC5O15392 142 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 HARSP12081 509 aaKnown RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 GYS1P13807 737 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 VAV1P15498 845 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 ZNF132P52740 706 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 BASP1P80723 227 aaKnown RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 ARHGAP8P85298 464 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 CDHR3Q6ZTQ4 885 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 TMEM35BQ8NCS4 154 aa20.55■□□□□ 0.88
SDF4-205ENST00000465727 ACSF2Q96CM8 615 aaPredicted RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 HERC5Q9UII4 1024 aaKnown RBP20.55■□□□□ 0.88
SDF4-205ENST00000465727 WEE2P0C1S8 567 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 CLCN2P51788 898 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 ALDH18A1P54886 795 aaKnown RBP20.54■□□□□ 0.88
SDF4-205ENST00000465727 YWHAGP61981 247 aaKnown RBP eCLIP20.54■□□□□ 0.88
SDF4-205ENST00000465727 DYNLT1P63172 113 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 KRT76Q01546 638 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 DPYSL3Q14195 570 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 CHI3L2Q15782 390 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 MDH1BQ5I0G3 518 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 ARCQ7LC44 396 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 NUDCD3Q8IVD9 361 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 IGDCC3Q8IVU1 814 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 RILPQ96NA2 401 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms