RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SYCP1Q15431 976 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 GOLGA7BQ2TAP0 167 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 RAB41Q5JT25 222 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 LUZP1Q86V48 1076 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF276Q8N554 614 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 STKLD1Q8NE28 680 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 DEPDC1BQ8WUY9 529 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 KCTD13Q8WZ19 329 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 TCEAL4Q96EI5 215 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 KCNK16Q96T55 309 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
LIMD1-203ENST00000465039 GANQ9H2C0 597 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 ATXN3LQ9H3M9 355 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 KCNK12Q9HB15 430 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 CYLDQ9NQC7 956 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 TRPM5Q9NZQ8 1165 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 SCML2Q9UQR0 700 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 USP3Q9Y6I4 520 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF840PA6NDX5 716 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 F8VZ95 297 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 DCXO43602 365 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 TADA3O75528 432 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 OLFM2O95897 454 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 ZDHHC11BP0C7U3 371 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 TCF3P15923 654 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 GNA15P30679 374 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 KIF11P52732 1056 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 MAP3K7CLP57077 242 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 TDGQ13569 410 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 TEAD2Q15562 447 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 FIGNQ5HY92 759 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 TTC30AQ86WT1 665 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 ARHGAP18Q8N392 663 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 NEK11Q8NG66 645 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 ZSCAN18Q8TBC5 510 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-203ENST00000465039 GPR152Q8TDT2 470 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 TFAP2BQ92481 460 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 HSFY1Q96LI6 401 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 NECAB3Q96P71 396 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-203ENST00000465039 CDK5RAP1Q96SZ6 601 aaKnown RBP14.47□□□□□ -0.09
LIMD1-203ENST00000465039 EDEM3Q9BZQ6 932 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 SLITRK6Q9H5Y7 841 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 ZFP14Q9HCL3 533 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 CD320Q9NPF0 282 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 PCDHGC3Q9UN70 934 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 MAGED2Q9UNF1 606 aaPredicted RBP14.47□□□□□ -0.09
LIMD1-203ENST00000465039 FHOD1Q9Y613 1164 aa14.47□□□□□ -0.09
LIMD1-203ENST00000465039 RNF225M0QZC1 329 aaPredicted RBP14.46□□□□□ -0.09
LIMD1-203ENST00000465039 SART1O43290 800 aaKnown RBP14.46□□□□□ -0.09
LIMD1-203ENST00000465039 BEST1O76090 585 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 SERPINC1P01008 464 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 FCARP24071 287 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 AVPR1AP37288 418 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 RPL34P49207 117 aaKnown RBP14.46□□□□□ -0.09
LIMD1-203ENST00000465039 JAM2P57087 298 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 USP46P62068 366 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 TAF10Q12962 218 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 DRAP1Q14919 205 aaPredicted RBP14.46□□□□□ -0.09
LIMD1-203ENST00000465039 ARHGAP44Q17R89 818 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 FAM78AQ5JUQ0 283 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 GPR158Q5T848 1215 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 SDHAF4Q5VUM1 108 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 GJB7Q6PEY0 223 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 KLHDC10Q6PID8 442 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 TADA2BQ86TJ2 420 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 PIGZQ86VD9 579 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF677Q86XU0 584 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 CMTM8Q8IZV2 173 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 SLC35F5Q8WV83 523 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 ING5Q8WYH8 240 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 FBXO32Q969P5 355 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 LHX5Q9H2C1 402 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 TRPV5Q9NQA5 729 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 SLC2A4RGQ9NR83 387 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 TLR8Q9NR97 1041 aaKnown RBP14.46□□□□□ -0.09
LIMD1-203ENST00000465039 FAM207AQ9NSI2 230 aaPredicted RBP14.46□□□□□ -0.09
LIMD1-203ENST00000465039 CLIC5Q9NZA1 410 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 NUMBLQ9Y6R0 609 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 ANAPC1Q9H1A4 1944 aa14.46□□□□□ -0.09
LIMD1-203ENST00000465039 TRAV19A0A0A6YYK7 116 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 FOXN3O00409 490 aaPredicted RBP14.45□□□□□ -0.1
LIMD1-203ENST00000465039 OAS1P00973 400 aaKnown RBP14.45□□□□□ -0.1
LIMD1-203ENST00000465039 USP17L7P0C7H9 530 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 CCDC172P0C7W6 258 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 SRFP11831 508 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 ACADSBP45954 432 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 SNX16P57768 344 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 PDE4CQ08493 712 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 FCHO2Q0JRZ9 810 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 RAPGEF1Q13905 1077 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 NR1I3Q14994 352 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 PM20D1Q6GTS8 502 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 CELF5Q8N6W0 485 aaKnown RBP14.45□□□□□ -0.1
LIMD1-203ENST00000465039 ZNF606Q8WXB4 792 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 IRGQQ8WZA9 623 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 MCRS1Q96EZ8 462 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 SPAG5Q96R06 1193 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms