RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 TAF4BQ92750 862 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 EZH1Q92800 747 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 TWNKQ96RR1 684 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 FAM126AQ9BYI3 521 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 EPC1Q9H2F5 836 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 ECT2Q9H8V3 914 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 TRPM5Q9NZQ8 1165 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 WNT6Q9Y6F9 365 aa13.91□□□□□ -0.18
CTDSP1-206ENST00000464255 FAM92AA1XBS5 289 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 OAS1P00973 400 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 PFKLP17858 780 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 ANXA13P27216 316 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 GJA4P35212 333 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 PSMC2P35998 433 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 PRCPP42785 496 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 NDST1P52848 882 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 SLC7A9P82251 487 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 INTS8Q75QN2 995 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 SYNPOQ8N3V7 929 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 WHAMMQ8TF30 809 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 SEMA4DQ92854 862 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 ERCC4Q92889 916 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 SMOQ99835 787 aa13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 POLR3BQ9NW08 1133 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
CTDSP1-206ENST00000464255 ATG2BQ96BY7 2078 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 LEFTY2O00292 366 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 HRO43593 1189 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 KIF20AO95235 890 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 EGFP01133 1207 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 CCDC130P13994 396 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 TGM1P22735 817 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 YWHAQP27348 245 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 HOXA6P31267 233 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 PPP3CCP48454 512 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 PMS1P54277 932 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 EDRF1Q3B7T1 1238 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 SNX30Q5VWJ9 437 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 CC2D1AQ6P1N0 951 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 UNC93AQ86WB7 457 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 SLC2A14Q8TDB8 520 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 RUBCNQ92622 972 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 CCDC47Q96A33 483 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 TNIP3Q96KP6 325 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 CSNK1G1Q9HCP0 422 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 CHORDC1Q9UHD1 332 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
CTDSP1-206ENST00000464255 SDK1Q7Z5N4 2213 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 ANTXRLA6NF34 631 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 CHURC1-FNTBB4DL54 471 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 HHLA1C9JL84 531 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 RPL13P26373 211 aaKnown RBP13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 PIK3CAP42336 1068 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 FNTBP49356 437 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 SLC5A3P53794 718 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 NRLP54845 237 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 NUCB2P80303 420 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 BECN1Q14457 450 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 TMEM8AQ9HCN3 771 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 DMAP1Q9NPF5 467 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 EHD2Q9NZN4 543 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 CPQQ9Y646 472 aa13.88□□□□□ -0.19
CTDSP1-206ENST00000464255 COCHO43405 550 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 AP1G2O75843 785 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 P4HA1P13674 534 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 GTF2H1P32780 548 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 MESP2Q0VG99 397 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 SRSF5Q13243 272 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 ANKRD40Q6AI12 368 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 GPRIN1Q7Z2K8 1008 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 KIAA2013Q8IYS2 634 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 CPA6Q8N4T0 437 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 KIAA1958Q8N8K9 716 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 TTC16Q8NEE8 873 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 OVCA2Q8WZ82 227 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 ATP2A3Q93084 1043 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 WBP2Q969T9 261 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 SMARCD1Q96GM5 515 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 HNRNPABQ99729 332 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 P2RY13Q9BPV8 354 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 CYP3A43Q9HB55 503 aa13.87□□□□□ -0.19
CTDSP1-206ENST00000464255 FAM49BQ9NUQ9 324 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms