RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 CLASP2O75122 1294 aaKnown RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 SOAT2O75908 522 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 RHOBTB1O94844 696 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 PAEPP09466 180 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 CDH18Q13634 790 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 TTLL9Q3SXZ7 439 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 LONP2Q86WA8 852 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 ZFPM1Q8IX07 1006 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 TNIP2Q8NFZ5 429 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 GID8Q9NWU2 228 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 AP4E1Q9UPM8 1137 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 OTUD4Q01804 1114 aaKnown RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 ACTN3Q08043 901 aaPredicted RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 ZNF268Q14587 947 aaPredicted RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 ZNF280DQ6N043 979 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 PFDN1O60925 122 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 NFE2Q16621 373 aaPredicted RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 AGAP9Q5VTM2 703 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 BRSK2Q8IWQ3 736 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 MCOLN2Q8IZK6 566 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 TSC22D3Q99576 134 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 INTS13Q9NVM9 706 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 H0Y626 953 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 INSRRP14616 1297 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 CDH2P19022 906 aaPredicted RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 SEC24CP53992 1094 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 KBTBD12Q3ZCT8 623 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 DENND5BQ6ZUT9 1274 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 UNC45BQ8IWX7 931 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC35C1Q96A29 364 aa13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 RPRD1AQ96P16 312 aaPredicted RBP13.94□□□□□ -0.18
CHRNA4-202ENST00000463705 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 ACKR2O00590 384 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CHI3L2Q15782 390 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 ZRANB3Q5FWF4 1079 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SNX31Q8N9S9 440 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 BRD8Q9H0E9 1235 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 COG4Q9H9E3 785 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC39A10Q9ULF5 831 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CYP3A7-CYP3A51PA0A087WV96 503 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 LRRC10BA6NIK2 292 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 STX7O15400 261 aaKnown RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 TBC1D12O60347 775 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 HSPA1AP0DMV8 641 aaKnown RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 HSPA1BP0DMV9 641 aaKnown RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CYP3A7P24462 503 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 RAP1GAPP47736 663 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 ORC1Q13415 861 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 MTM1Q13496 603 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 AMHR2Q16671 573 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 FBXO36Q8NEA4 188 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 ERP27Q96DN0 273 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 AVENQ9NQS1 362 aaPredicted RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 DMGDHQ9UI17 866 aaKnown RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SLC24A2Q9UI40 661 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CXCL8P10145 99 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 MTMR8Q96EF0 704 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SPATA16Q9BXB7 569 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 TMEM134Q9H6X4 195 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 PRDM16Q9HAZ2 1276 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 TMBIM4Q9HC24 238 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 WARS2Q9UGM6 360 aaKnown RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CCDC78A2IDD5 438 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CCT8L1PA6NM43 557 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 GOLGA8TH3BQL2 631 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 ADCY3O60266 1144 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SOX10P56693 466 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 POLD3Q15054 466 aaPredicted RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 AASDHQ4L235 1098 aaPredicted RBP13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SPDYAQ5MJ70 313 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 SDE2Q6IQ49 451 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 TEKT4Q8WW24 435 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 ABHD16BQ9H3Z7 469 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 RUBCNLQ9H714 662 aa13.93□□□□□ -0.18
CHRNA4-202ENST00000463705 CASZ1Q86V15 1759 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 EML1O00423 815 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 PTENP60484 403 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 GRIK5Q16478 980 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 LY6KQ17RY6 165 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 ICE2Q659A1 982 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 KCNK18Q7Z418 384 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 KCNMB3Q9NPA1 279 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 CRLS1Q9UJA2 301 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 HEATR9A2RTY3 570 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 HNRNPCL2B2RXH8 293 aa13.92□□□□□ -0.18
CHRNA4-202ENST00000463705 SMIM22K7EJ46 135 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms