RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 EML5Q05BV3 1969 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 KMT2BQ9UMN6 2715 aaPredicted RBP16.31■□□□□ 0.2
CMSS1-202ENST00000463526 PATE3B3GLJ2 98 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 GIPC1O14908 333 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 TGFB1I1O43294 461 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 KLF8O95600 359 aaPredicted RBP16.31■□□□□ 0.2
CMSS1-202ENST00000463526 HNRNPLP14866 589 aaKnown RBP eCLIP16.31■□□□□ 0.29e-8■■□□□ 11.7
CMSS1-202ENST00000463526 NOVA1P51513 510 aaKnown RBP16.31■□□□□ 0.2
CMSS1-202ENST00000463526 KDSRQ06136 332 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 MESP2Q0VG99 397 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 TRPC3Q13507 836 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 FAM26FQ5R3K3 315 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 PMS2CLQ68D20 193 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 TMEM92Q6UXU6 159 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 CYP2U1Q7Z449 544 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 C12orf40Q86WS4 652 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 ALLCQ8N6M5 410 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 TXNDC5Q8NBS9 432 aaKnown RBP16.31■□□□□ 0.2
CMSS1-202ENST00000463526 MDGA1Q8NFP4 955 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 ZNF507Q8TCN5 953 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 RLN3Q8WXF3 142 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 PIGKQ92643 395 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 PNKPQ96T60 521 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 CGRRF1Q99675 332 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 B3GNT5Q9BYG0 378 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 TMEM30AQ9NV96 361 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 MMP17Q9ULZ9 603 aa16.31■□□□□ 0.2
CMSS1-202ENST00000463526 ANAPC1Q9H1A4 1944 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 A8MXQ7 604 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 SLC9A3R1O14745 358 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 KHNYNO15037 678 aaKnown RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 SPTLC2O15270 562 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 STX6O43752 255 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 TACC1O75410 805 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 APODP05090 189 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 PFKLP17858 780 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CASP1P29466 404 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 MYL6P60660 151 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 NOP14P78316 857 aaKnown RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 AMPD3Q01432 767 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CYP24A1Q07973 514 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 PSMD6Q15008 389 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 E2F4Q16254 413 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CRY1Q16526 586 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 RHBDF2Q6PJF5 856 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 EPM2AIP1Q7L775 607 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 RASSF3Q86WH2 238 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 ZNF516Q92618 1163 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 FBXO32Q969P5 355 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 ELMO3Q96BJ8 720 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 KBTBD4Q9NVX7 518 aa16.3■□□□□ 0.2
CMSS1-202ENST00000463526 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 MORC2Q9Y6X9 1032 aaPredicted RBP16.3■□□□□ 0.2
CMSS1-202ENST00000463526 LNP1A1A4G5 178 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 SGK1O00141 431 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 MAP3K13O43283 966 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 PHACTR2O75167 634 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 ALDH1A2O94788 518 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 KAT7O95251 611 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 OAS1P00973 400 aaKnown RBP16.29■□□□□ 0.2
CMSS1-202ENST00000463526 YWHAQP27348 245 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 PPP3CCP48454 512 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
CMSS1-202ENST00000463526 UAP1L1Q3KQV9 507 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 ARMCX6Q7L4S7 300 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 PGBD3Q8N328 593 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 FRMD1Q8N878 549 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 NAT16Q8N8M0 369 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 XXYLT1Q8NBI6 393 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 MED10Q9BTT4 135 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 ELOVL4Q9GZR5 314 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 BLZF1Q9H2G9 400 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
CMSS1-202ENST00000463526 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■□ 21.9
CMSS1-202ENST00000463526 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 OLFM2O95897 454 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 ADH1CP00326 375 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 ADH5P11766 374 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 CASP4P49662 377 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 CDH8P55286 799 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 IRX4P78413 519 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 SHC2P98077 582 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
CMSS1-202ENST00000463526 LY6G5CQ5SRR4 150 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 SH3PXD2AQ5TCZ1 1133 aa16.28■□□□□ 0.2
CMSS1-202ENST00000463526 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
CMSS1-202ENST00000463526 TMEFF1Q8IYR6 380 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms