RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 FAM92AA1XBS5 289 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 SLC38A8A6NNN8 435 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 RTN2O75298 545 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 RFPL2O75678 378 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 HMGA1P17096 107 aaKnown RBP14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 MMP8P22894 467 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 GABRB2P47870 512 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 ALDH1A3P47895 512 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 SLC5A3P53794 718 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 USP46P62068 366 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 MTMR3Q13615 1198 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 PPM1LQ5SGD2 360 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 LIN9Q5TKA1 542 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 ALKBH5Q6P6C2 394 aaKnown RBP14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 NUP93Q8N1F7 819 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 DEFB123Q8N688 67 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 CCDC112Q8NEF3 446 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 SCAMP5Q8TAC9 235 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 FEZF2Q8TBJ5 459 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 CASP10Q92851 521 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 PPP1R13BQ96KQ4 1090 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 TTLL2Q9BWV7 592 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 KCNF1Q9H3M0 494 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 DEF6Q9H4E7 631 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 DPP7Q9UHL4 492 aa14.64□□□□□ -0.07
PHACTR4-203ENST00000463428 BRWD1Q9NSI6 2320 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 FAM170AA1A519 330 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 EIF3CLB5ME19 914 aaKnown RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 AKR1B10O60218 316 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 NDUFA10O95299 355 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 FTLP02792 175 aaPredicted RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ERBB2P04626 1255 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 PTMAP06454 111 aaKnown RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 POU2F2P09086 479 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 HNRNPA1P09651 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ACADSBP45954 432 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 EPHB3P54753 998 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 PLD1Q13393 1074 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 CCDC122Q5T0U0 273 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 PM20D1Q6GTS8 502 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 DENND5BQ6ZUT9 1274 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 MON1BQ7L1V2 547 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 DNAJB7Q7Z6W7 309 aaPredicted RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ERICH1Q86X53 443 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 MCOLN2Q8IZK6 566 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 SCML4Q8N228 414 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 PSMG2Q969U7 264 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ZNF707Q96C28 371 aaPredicted RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 MYRFLQ96LU7 910 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ZNF830Q96NB3 372 aaPredicted RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 EIF3CQ99613 913 aaKnown RBP14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 LRRC3Q9BY71 257 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 COMMD8Q9NX08 183 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ZDHHC7Q9NXF8 308 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 ASB3Q9Y575 518 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 DENND4CQ5VZ89 1909 aa14.63□□□□□ -0.07
PHACTR4-203ENST00000463428 TMCO5BA8MYB1 307 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 E5RJQ4 531 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 PIK3R2O00459 728 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 PAPSS1O43252 624 aaPredicted RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 LRG1P02750 347 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 CSH1P0DML2 217 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 CSH2P0DML3 217 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 CYLC1P35663 651 aaPredicted RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 NSFP46459 744 aaKnown RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 TKTL1P51854 596 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 C2CD6Q53TS8 623 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 SYCE2Q6PIF2 218 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 MMS22LQ6ZRQ5 1243 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 BHLHA9Q7RTU4 235 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 C12orf76Q8N812 135 aaPredicted RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 CMASQ8NFW8 434 aaPredicted RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 C18orf8Q96DM3 657 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 TRMT2BQ96GJ1 504 aaKnown RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 VCPIP1Q96JH7 1222 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 NOX5Q96PH1 765 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 PRKD2Q9BZL6 878 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 ULBP1Q9BZM6 244 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 LRRC4Q9HBW1 653 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 ST7Q9NRC1 585 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 DZANK1Q9NVP4 752 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 ADAM22Q9P0K1 906 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 CLEC1BQ9P126 229 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 REXO2Q9Y3B8 237 aaKnown RBP14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 C2orf16Q68DN1 1984 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 NCANO14594 1321 aa14.62□□□□□ -0.07
PHACTR4-203ENST00000463428 MYO16Q9Y6X6 1858 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 CCDC195A0A1B0GUA6 201 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 TCRBV5S1A1TA0A578 114 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 CCL16O15467 120 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 ARHGAP6O43182 974 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 NCK2O43639 380 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 RTN3O95197 1032 aaPredicted RBP14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 LCP1P13796 627 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 LTBRP36941 435 aa14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 GSCP56915 257 aaPredicted RBP14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 DLX2Q07687 328 aaPredicted RBP14.61□□□□□ -0.07
PHACTR4-203ENST00000463428 ADIGQ0VDE8 80 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms