RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 ERV3-1Q14264 604 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 KRT71Q3SY84 523 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 DEPDC1Q5TB30 811 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 FCRL6Q6DN72 434 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 TMEM65Q6PI78 240 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 VSTM1Q6UX27 236 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 SKAP1Q86WV1 359 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 SFTPA1Q8IWL2 248 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 NRACQ8N912 160 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 SOCS4Q8WXH5 440 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 NR4A3Q92570 626 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 CAMKK2Q96RR4 588 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 SMAD5Q99717 465 aaKnown RBP3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 EFHD1Q9BUP0 239 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 ASPSCR1Q9BZE9 553 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 MRPL46Q9H2W6 279 aaKnown RBP3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 PNPOQ9NVS9 261 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 AMFRQ9UKV5 643 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 TMX2Q9Y320 296 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 SPEF1Q9Y4P9 236 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 PAXBP1Q9Y5B6 917 aa3.08□□□□□ -1.92
NDUFA4-202ENST00000463308 FER1L4A9Z1Z3 1794 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 CD8B2A6NJW9 211 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 LACTBL1A8MY62 500 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 CES2O00748 559 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 UNC5CO95185 931 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 CRYABP02511 175 aaKnown RBP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 POU2F2P09086 479 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 VCAM1P19320 739 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 SFPQP23246 707 aaKnown RBP eCLIP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 PRKAR1BP31321 381 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 RECQLP46063 649 aaPredicted RBP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 RPS13P62277 151 aaKnown RBP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 ZNF91Q05481 1191 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 BOP1Q14137 746 aaKnown RBP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 MLC1Q15049 377 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 CC2D1BQ5T0F9 858 aaKnown RBP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 C10orf25Q5T742 122 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 USP45Q70EL2 814 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 MPLKIPQ8TAP9 179 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 COQ8BQ96D53 544 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 CDK5RAP3Q96JB5 506 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 MMS19Q96T76 1030 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 MACROD1Q9BQ69 325 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 NDRG4Q9ULP0 352 aaKnown RBP3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 PCDHA1Q9Y5I3 950 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 HS3ST3B1Q9Y662 390 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 ZMYM2Q9UBW7 1377 aa3.07□□□□□ -1.92
NDUFA4-202ENST00000463308 M0R3H8 397 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 ABLIM3O94929 683 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 PDE8BO95263 885 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 SYF2O95926 243 aaKnown RBP3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 AHSGP02765 367 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 THP07101 528 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 TYRP14679 529 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 ALDH5A1P51649 535 aaPredicted RBP3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 MAP2K6P52564 334 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 WNT3P56703 355 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 SOX8P57073 446 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 HTRA4P83105 476 aaPredicted RBP3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 EXOSC9Q06265 439 aaKnown RBP3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 KHDC1LQ5JSQ8 128 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 MEX3CQ5U5Q3 659 aaKnown RBP3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 EMC10Q5UCC4 262 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 PDXDC1Q6P996 788 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 IRF2BP2Q7Z5L9 587 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 CAND1Q86VP6 1230 aaKnown RBP3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 PPP1R3BQ86XI6 285 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 ADHFE1Q8IWW8 467 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 SPARTQ8N0X7 666 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 ARFGAP1Q8N6T3 406 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 RSPRY1Q96DX4 576 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 TRMOQ9BU70 441 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 HIPK2Q9H2X6 1198 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 PCDH12Q9NPG4 1184 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 GABRQQ9UN88 632 aa3.06□□□□□ -1.92
NDUFA4-202ENST00000463308 B4DGG1 531 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 AP4M1O00189 453 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 IL33O95760 270 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 CD63P08962 238 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 PRF1P14222 555 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 HDCP19113 662 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 E2F1Q01094 437 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 SP2Q02086 613 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 PGS1Q32NB8 556 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 SLC9C1Q4G0N8 1177 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 CERCAMQ5T4B2 595 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 COLCA1Q6ZS62 124 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 CATIPQ7Z7H3 387 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 IZUMO1Q8IYV9 350 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 SLC35A4Q96G79 324 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 VCPIP1Q96JH7 1222 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 ZFYVE19Q96K21 471 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 ZCWPW1Q9H0M4 648 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 FAM234AQ9H0X4 552 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 HOMER2Q9NSB8 354 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 SSX2IPQ9Y2D8 614 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 COL4A3BPQ9Y5P4 624 aa3.05□□□□□ -1.92
NDUFA4-202ENST00000463308 NOTCH3Q9UM47 2321 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms