RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 RTN3O95197 1032 aaPredicted RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 APBB3O95704 486 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 OAS1P00973 400 aaKnown RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 MYL1P05976 194 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 HSP90AA1P07900 732 aaKnown RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 ZNF806P0C7X5 589 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 AFMP43652 599 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 PXNP49023 591 aaPredicted RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 TAF10Q12962 218 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 FOXD4L5Q5VV16 416 aaPredicted RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 DDX42Q86XP3 938 aaKnown RBP eCLIP19.01■□□□□ 0.63
SSB-206ENST00000461708 PDZD8Q8NEN9 1154 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 RPLP0P6Q8NHW5 317 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 PARD3BQ8TEW8 1205 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 FOXD4L4Q8WXT5 416 aaPredicted RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 DDX1Q92499 740 aaKnown RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 B3GNT5Q9BYG0 378 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 ZNF518BQ9C0D4 1074 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 RNF38Q9H0F5 515 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 DPEP3Q9H4B8 488 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 TMEM30AQ9NV96 361 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 NXF1Q9UBU9 619 aaKnown RBP19.01■□□□□ 0.63
SSB-206ENST00000461708 USP25Q9UHP3 1055 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 LAMA1P25391 3075 aa19.01■□□□□ 0.63
SSB-206ENST00000461708 ATP8B3O60423 1300 aa19■□□□□ 0.63
SSB-206ENST00000461708 DCDC2BA2VCK2 349 aa19■□□□□ 0.63
SSB-206ENST00000461708 KLRC4O43908 158 aa19■□□□□ 0.63
SSB-206ENST00000461708 CCDC192P0DO97 292 aa19■□□□□ 0.63
SSB-206ENST00000461708 YWHAQP27348 245 aa19■□□□□ 0.63
SSB-206ENST00000461708 CACNA2D1P54289 1103 aa19■□□□□ 0.63
SSB-206ENST00000461708 DMC1Q14565 340 aa19■□□□□ 0.63
SSB-206ENST00000461708 GAB4Q2WGN9 574 aa19■□□□□ 0.63
SSB-206ENST00000461708 SNX30Q5VWJ9 437 aa19■□□□□ 0.63
SSB-206ENST00000461708 KBTBD6Q86V97 674 aa19■□□□□ 0.63
SSB-206ENST00000461708 ADGRG2Q8IZP9 1017 aa19■□□□□ 0.63
SSB-206ENST00000461708 NUP93Q8N1F7 819 aa19■□□□□ 0.63
SSB-206ENST00000461708 TTC16Q8NEE8 873 aa19■□□□□ 0.63
SSB-206ENST00000461708 TNIP3Q96KP6 325 aa19■□□□□ 0.63
SSB-206ENST00000461708 DUSP9Q99956 384 aaKnown RBP19■□□□□ 0.63
SSB-206ENST00000461708 COMMD8Q9NX08 183 aa19■□□□□ 0.63
SSB-206ENST00000461708 IL37Q9NZH6 218 aa19■□□□□ 0.63
SSB-206ENST00000461708 LRRIQ3A6PVS8 624 aaPredicted RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 PDXKO00764 312 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 ACTN4O43707 911 aaKnown RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 C4BPAP04003 597 aaKnown RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 RPN1P04843 607 aaKnown RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 OPRD1P41143 372 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 EIF2DP41214 584 aaKnown RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 TUBP50607 506 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 STK4Q13043 487 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 NCOA4Q13772 614 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 ZNF699Q32M78 642 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 FOXD4L6Q3SYB3 417 aaPredicted RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 ZNF667Q5HYK9 610 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 PLA2G2CQ5R387 149 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 FOXD4L3Q6VB84 417 aaPredicted RBP18.99■□□□□ 0.63
SSB-206ENST00000461708 PLEKHO2Q8TD55 490 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 USP33Q8TEY7 942 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 TAF4BQ92750 862 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 PAGE5Q96GU1 130 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 HHIPQ96QV1 700 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 ARRDC1-AS1Q9H2J1 176 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 SERTAD1Q9UHV2 236 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 CPQQ9Y646 472 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 CEP295Q9C0D2 2601 aa18.99■□□□□ 0.63
SSB-206ENST00000461708 FAM92AA1XBS5 289 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 K7EQS6 105 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 IKBKBO14920 756 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 CYP17A1P05093 508 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 P4HA1P13674 534 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 CMA1P23946 247 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 CASP4P49662 377 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 BIRC3Q13489 604 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 PLK5Q496M5 336 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 FILIP1Q7Z7B0 1213 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 C11orf74Q86VG3 221 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 KIAA0895Q8NCT3 520 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 TMC2Q8TDI7 906 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 OTUB2Q96DC9 234 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 KCTD10Q9H3F6 313 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 SMYD3Q9H7B4 428 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 DMAP1Q9NPF5 467 aaPredicted RBP18.98■□□□□ 0.63
SSB-206ENST00000461708 TBC1D14Q9P2M4 693 aa18.98■□□□□ 0.63
SSB-206ENST00000461708 A0A0A0MRY4 1105 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 E2F8A0AVK6 867 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 CLDN5O00501 218 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 TNFRSF10BO14763 440 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 ADRB1P08588 477 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 MRPS21P82921 87 aaKnown RBP18.97■□□□□ 0.63
SSB-206ENST00000461708 DNM1Q05193 864 aaKnown RBP18.97■□□□□ 0.63
SSB-206ENST00000461708 DHCR24Q15392 516 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 SGSM1Q2NKQ1 1148 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 ZACNQ401N2 412 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 HSF5Q4G112 596 aaPredicted RBP18.97■□□□□ 0.63
SSB-206ENST00000461708 PAQR9Q6ZVX9 377 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 FAM35AQ86V20 835 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 GRAMD1CQ8IYS0 662 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 SMARCD1Q96GM5 515 aa18.97■□□□□ 0.63
SSB-206ENST00000461708 DUSP15Q9H1R2 295 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms