RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 GRXCR1A8MXD5 290 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 RGS10O43665 173 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 RASAL1O95294 804 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 PEX11BO96011 259 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 VIPP01282 170 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 DHRS4L1P0CG22 281 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 VEGFAP15692 232 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 CHRM3P20309 590 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 KCNA3P22001 575 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 EPHA3P29320 983 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 PRKAR1BP31321 381 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 SCNN1GP51170 649 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 VAV2P52735 878 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF134P52741 427 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 BCAT1P54687 386 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 BLOC1S1P78537 153 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 FPGSQ05932 587 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ITIH3Q06033 890 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 CYP2A13Q16696 494 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 BEAN1Q3B7T3 259 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ADCK5Q3MIX3 580 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 NRN1LQ496H8 165 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 RRAGBQ5VZM2 374 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 CCDC70Q6NSX1 233 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 KLHL17Q6TDP4 642 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 CRTC1Q6UUV9 634 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ZDHHC24Q6UX98 284 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 TTC30AQ86WT1 665 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 NRSN1Q8IZ57 195 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 FAM9AQ8IZU1 332 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 TMEM132CQ8N3T6 1108 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ATG16L2Q8NAA4 619 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 MBD3L2Q8NHZ7 208 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF483Q8TF39 744 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ABHD5Q8WTS1 349 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 FAM136AQ96C01 138 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 TBATAQ96M53 351 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 PRPF18Q99633 342 aaKnown RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ZSWIM1Q9BR11 485 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 NUDT22Q9BRQ3 303 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 INO80BQ9C086 356 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 PCDHAC1Q9H158 963 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 TP63Q9H3D4 680 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF703Q9H7S9 590 aaPredicted RBP3.55□□□□□ -1.84
HDAC6-212ENST00000461608 SAYSD1Q9NPB0 183 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 OBP2BQ9NPH6 170 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 CASS4Q9NQ75 786 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 HPSEQ9Y251 543 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 DTNAQ9Y4J8 743 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 AATKQ6ZMQ8 1374 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 F5H697 171 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 M0R3H8 397 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF185O15231 689 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ASNA1O43681 348 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 SNX2O60749 519 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 CD19P15391 556 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 PAX3P23760 479 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 DDX6P26196 483 aaKnown RBP eCLIP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RBL1P28749 1068 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ATICP31939 592 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 PTGS2P35354 604 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 PAPOLAP51003 745 aaKnown RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 TIAL1Q01085 375 aaKnown RBP eCLIP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 MC2RQ01718 297 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 FOXE3Q13461 319 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ATP1A4Q13733 1029 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 TOB2Q14106 344 aaPredicted RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 BOP1Q14137 746 aaKnown RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ST3GAL2Q16842 350 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RBM20Q5T481 1227 aaKnown RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ARHGAP40Q5TG30 622 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 B3GNTL1Q67FW5 361 aaPredicted RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RGS7BPQ6MZT1 257 aaPredicted RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RAB11FIP2Q7L804 512 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RAB11FIP4Q86YS3 637 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RASGRP3Q8IV61 690 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 SYNE4Q8N205 404 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 Q8NA96 180 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 CPT1CQ8TCG5 803 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 IPO4Q8TEX9 1081 aaKnown RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 OSCP1Q8WVF1 389 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 WDR60Q8WVS4 1066 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 THAP4Q8WY91 577 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 TMEM125Q96AQ2 219 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 GRAMD1AQ96CP6 724 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RSPRY1Q96DX4 576 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 RNF31Q96EP0 1072 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ALG8Q9BVK2 526 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ALOXE3Q9BYJ1 711 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 CXorf36Q9H7Y0 433 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 AKIP1Q9NQ31 210 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 MRPS18AQ9NVS2 196 aaKnown RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 GJD2Q9UKL4 321 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 ZMYND8Q9ULU4 1186 aaPredicted RBP3.54□□□□□ -1.84
HDAC6-212ENST00000461608 SH2B3Q9UQQ2 575 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 GPR52Q9Y2T5 361 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 TNFRSF18Q9Y5U5 241 aa3.54□□□□□ -1.84
HDAC6-212ENST00000461608 TRIM38O00635 465 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 SH3BP5O60239 455 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms