RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TTYH3Q9C0H2 523 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 TAF1DQ9H5J8 278 aaPredicted RBP3.39□□□□□ -1.87
HPS3-203ENST00000460822 REXO2Q9Y3B8 237 aaKnown RBP3.39□□□□□ -1.87
HPS3-203ENST00000460822 A6NCN8 305 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 B4E171 279 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 PCDH17O14917 1159 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DNPH1O43598 174 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 RRP9O43818 475 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 GLP2RO95838 553 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 CHEK2O96017 543 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 POMCP01189 267 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ITGB1P05556 798 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ADH4P08319 380 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 C1SP09871 688 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 VIPR2P41587 438 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TSPAN7P41732 249 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 BCAT1P54687 386 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DGCR2P98153 550 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 NSUN2Q08J23 767 aaKnown RBP eCLIP3.38□□□□□ -1.87
HPS3-203ENST00000460822 TUBA3CQ13748 450 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 PDE1CQ14123 709 aaPredicted RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 ELAVL1Q15717 326 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 NBPF8Q3BBV2 869 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 FAXCQ5TGI0 409 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 CACHD1Q5VU97 1274 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TUBA3EQ6PEY2 450 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 KRT73Q86Y46 540 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 CPT1CQ8TCG5 803 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 SMCR8Q8TEV9 937 aaPredicted RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 ZBTB10Q96DT7 871 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 RRP36Q96EU6 259 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 MESP1Q9BRJ9 268 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 RTKNQ9BST9 563 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DDX23Q9BUQ8 820 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 PCED1AQ9H1Q7 454 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 SH3BP1Q9Y3L3 701 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ITIH6Q6UXX5 1313 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TBKBP1A7MCY6 615 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 CCP110O43303 1012 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 COQ9O75208 318 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 IPO13O94829 963 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 SLPIP03973 132 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 XRCC6P12956 609 aaKnown RBP eCLIP3.38□□□□□ -1.87
HPS3-203ENST00000460822 FDXRP22570 491 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 MAN2A2P49641 1150 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ALDH18A1P54886 795 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 NR1H2P55055 460 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 POLE2P56282 527 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 WNT3P56703 355 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TLE2Q04725 743 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 UBE3AQ05086 875 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 SCAPQ12770 1279 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TRPC3Q13507 836 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 EFR3AQ14156 821 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DLGAP5Q15398 846 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 NPY5RQ15761 445 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 INSCQ1MX18 579 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ATXN7L2Q5T6C5 722 aaPredicted RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 CCDC30Q5VVM6 783 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 RRAGAQ7L523 313 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 GAS2L3Q86XJ1 694 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ZNF280BQ86YH2 543 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TMPRSS6Q8IU80 811 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 SLC44A2Q8IWA5 706 aaPredicted RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 RNF169Q8NCN4 708 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 NGDNQ8NEJ9 315 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 CSGALNACT1Q8TDX6 532 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TFAP2CQ92754 450 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 COG8Q96MW5 612 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 SLC46A1Q96NT5 459 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 TLR10Q9BXR5 811 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 XPNPEP3Q9NQH7 507 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 ZSCAN32Q9NX65 697 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 CLIC5Q9NZA1 410 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DNMT3BQ9UBC3 853 aaKnown RBP3.38□□□□□ -1.87
HPS3-203ENST00000460822 DKK4Q9UBT3 224 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 HESX1Q9UBX0 185 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 CAPN11Q9UMQ6 739 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DAPP1Q9UN19 280 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 SLC45A1Q9Y2W3 748 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 DTNAQ9Y4J8 743 aa3.38□□□□□ -1.87
HPS3-203ENST00000460822 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 H0Y3Z8 333 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 DCLK1O15075 740 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 PLSCR1O15162 318 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 HOXA3O43365 443 aaPredicted RBP3.37□□□□□ -1.87
HPS3-203ENST00000460822 PIAS2O75928 621 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 RASAL1O95294 804 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 SRGAP2BP0DMP2 458 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 ARP10275 920 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 CYP2C9P11712 490 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 RXRAP19793 462 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 CHRM3P20309 590 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 MAKP20794 623 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 KLRK1P26718 216 aa3.37□□□□□ -1.87
HPS3-203ENST00000460822 AKT1P31749 480 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms