RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 GHRP10912 638 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 HOXD10P28358 340 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 EEF1DP29692 281 aaKnown RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 PPATQ06203 517 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 PTK6Q13882 451 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 RBBP7Q16576 425 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ARSHQ5FYA8 562 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 PTF1AQ7RTS3 328 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 CXorf38Q8TB03 319 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 BCL9LQ86UU0 1499 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ZNF263O14978 683 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 INSRRP14616 1297 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 PRUNE1Q86TP1 453 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 CEP70Q8NHQ1 597 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 INPP4AQ96PE3 977 aaPredicted RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 RXFP1Q9HBX9 757 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 DCDC2Q9UHG0 476 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 TSR3Q9UJK0 312 aaKnown RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 PCDHAC2Q9Y5I4 1007 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 UBIAD1Q9Y5Z9 338 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 NCANO14594 1321 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 F9P00740 461 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 APOA4P06727 396 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ADRB2P07550 413 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 CAPRIN1Q14444 709 aaKnown RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 CCDC33Q8N5R6 958 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ATXN2LQ8WWM7 1075 aaKnown RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 SNX19Q92543 992 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 TRIM54Q9BYV2 358 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ITGA11Q9UKX5 1188 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 DNPEPQ9ULA0 475 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 CASZ1Q86V15 1759 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 NID2Q14112 1375 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 TGFB1I1O43294 461 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 TM4SF1P30408 202 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
PTPRU-205ENST00000460170 COPAP53621 1224 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 CRY2Q49AN0 593 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 AADACL2Q6P093 401 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 NDUFS3O75489 264 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 SETSIPP0DME0 302 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 NBPF20Q3BBV1 942 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 LRRC23Q53EV4 343 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 DEFB132Q7Z7B7 95 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 KATNAL2Q8IYT4 538 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 TEX9Q8N6V9 391 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 RMDN2Q96LZ7 410 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ASB7Q9H672 318 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 FAM8A1Q9UBU6 413 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 WARS2Q9UGM6 360 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 AURKCQ9UQB9 309 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 H3BRB1 525 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ABCE1P61221 599 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 CNTN2Q02246 1040 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 RAD51Q06609 339 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 MAPRE1Q15691 268 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ABTB1Q969K4 478 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ILKAPQ9H0C8 392 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 TUT1Q9H6E5 874 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 LRRC40Q9H9A6 602 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 TSPAN16Q9UKR8 245 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ROBO3Q96MS0 1386 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 KNDC1Q76NI1 1749 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 DAB2IPQ5VWQ8 1189 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 EP400NLQ6ZTU2 488 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 CCDC60Q8IWA6 550 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 SHC3Q92529 594 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 TBCBQ99426 244 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 DDX50Q9BQ39 737 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 STMN1P16949 149 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 VHLP40337 213 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 NDST1P52848 882 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 MTDHQ86UE4 582 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 HES6Q96HZ4 224 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ADARB2Q9NS39 739 aaKnown RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 C17orf102A2RUQ5 167 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 PMPCBO75439 489 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 CYP1A2P05177 515 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ELK3P41970 407 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 PDCD2Q16342 344 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-205ENST00000460170 ADGRF2Q8IZF7 708 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 PCYOX1LQ8NBM8 494 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 PORCNQ9H237 461 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 PCYOX1Q9UHG3 505 aa15.3■□□□□ 0.04
PTPRU-205ENST00000460170 CYB561D2O14569 222 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 PAEPP09466 180 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 KCNA3P22001 575 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 BST2Q10589 180 aaKnown RBP15.29■□□□□ 0.04
PTPRU-205ENST00000460170 INPP5AQ14642 412 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 ELMOD1Q8N336 334 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 CXorf56Q9H5V9 222 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 TIMM44O43615 452 aa15.29■□□□□ 0.04
PTPRU-205ENST00000460170 GJB6O95452 261 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms