RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SLC46A2Q9BY10 475 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 CRTAC1Q9NQ79 661 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 NOP14P78316 857 aaKnown RBP16.56■□□□□ 0.24
SDF4-204ENST00000459994 TSPY1Q01534 308 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 FCHO2Q0JRZ9 810 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 FIGNQ5HY92 759 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 ZNF667Q5HYK9 610 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 KLHDC7AQ5VTJ3 777 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.56■□□□□ 0.24
SDF4-204ENST00000459994 TMEM86AQ8N2M4 240 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 NEK11Q8NG66 645 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 DEPDC1BQ8WUY9 529 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 CLDN23Q96B33 292 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
SDF4-204ENST00000459994 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 EDEM3Q9BZQ6 932 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 GPR88Q9GZN0 384 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 APOBEC3GQ9HC16 384 aaKnown RBP16.56■□□□□ 0.24
SDF4-204ENST00000459994 APEX2Q9UBZ4 518 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 MAGED2Q9UNF1 606 aaPredicted RBP16.56■□□□□ 0.24
SDF4-204ENST00000459994 CCL26Q9Y258 94 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 PIAS3Q9Y6X2 628 aa16.56■□□□□ 0.24
SDF4-204ENST00000459994 SLC38A8A6NNN8 435 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 ZNF263O14978 683 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 NOL4O94818 638 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 PDGFRBP09619 1106 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 FAM163BP0C2L3 166 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 P4HA1P13674 534 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 KLK7P49862 253 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 GCNT1Q02742 428 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 TNK2Q07912 1038 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 VEPH1Q14D04 833 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 TXNDC8Q6A555 127 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 FAM171BQ6P995 826 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 TXNDC11Q6PKC3 985 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 TSSK4Q6SA08 328 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 ZNF852Q6ZMS4 543 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 MAB21L3Q8N8X9 362 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 IRF7Q92985 503 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 TATDN2Q93075 761 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 NKD2Q969F2 451 aaPredicted RBP16.55■□□□□ 0.24
SDF4-204ENST00000459994 SYT15Q9BQS2 421 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 OSBPL6Q9BZF3 934 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 GANQ9H2C0 597 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 FAM124BQ9H5Z6 455 aaPredicted RBP16.55■□□□□ 0.24
SDF4-204ENST00000459994 TASP1Q9H6P5 420 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 FAM207AQ9NSI2 230 aaPredicted RBP16.55■□□□□ 0.24
SDF4-204ENST00000459994 SPATA6Q9NWH7 488 aaPredicted RBP16.55■□□□□ 0.24
SDF4-204ENST00000459994 GTSE1Q9NYZ3 720 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.24
SDF4-204ENST00000459994 EML5Q05BV3 1969 aa16.55■□□□□ 0.24
SDF4-204ENST00000459994 UCHL3P15374 230 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 TBXAS1P24557 533 aaPredicted RBP16.54■□□□□ 0.24
SDF4-204ENST00000459994 HOXC13P31276 330 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 LHX1P48742 406 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 SMARCB1Q12824 385 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 LRMPQ12912 555 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 WDR72Q3MJ13 1102 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 SPOPLQ6IQ16 392 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 ENOSF1Q7L5Y1 443 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 FAM3CQ92520 227 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
SDF4-204ENST00000459994 MYLPFQ96A32 169 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 JAKMIP2Q96AA8 810 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 SLC22A12Q96S37 553 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 NAA15Q9BXJ9 866 aaKnown RBP16.54■□□□□ 0.24
SDF4-204ENST00000459994 BCO2Q9BYV7 579 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 DPEP3Q9H4B8 488 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 CYP3A43Q9HB55 503 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 TRPV5Q9NQA5 729 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 TMEM30AQ9NV96 361 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 MYOFQ9NZM1 2061 aa16.54■□□□□ 0.24
SDF4-204ENST00000459994 CHADO15335 359 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 WARSP23381 471 aaKnown RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 CDC25CP30307 473 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 CACNA2D1P54289 1103 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 TNNC1P63316 161 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 APBA1Q02410 837 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 MTAPQ13126 283 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 CUL2Q13617 745 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 TRIM14Q14142 442 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 GAS6Q14393 721 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 TAF12Q16514 161 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 NFE2Q16621 373 aaPredicted RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 ARHGAP15Q53QZ3 475 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 DPH6Q7L8W6 267 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 SPATA2LQ8IUW3 424 aaPredicted RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 ARHGEF19Q8IW93 802 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 SCN4BQ8IWT1 228 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 CMTM8Q8IZV2 173 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 MMS19Q96T76 1030 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 UBE2TQ9NPD8 197 aaPredicted RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 RBM12Q9NTZ6 932 aaKnown RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
SDF4-204ENST00000459994 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms