RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 MIIPQ5JXC2 388 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 ARHGAP17Q68EM7 881 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 PHLDB3Q6NSJ2 640 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 PDZD8Q8NEN9 1154 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 KAT5Q92993 513 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 BPIFA3Q9BQP9 254 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 TRPV4Q9HBA0 871 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 TRPC7Q9HCX4 862 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 COMMD8Q9NX08 183 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 HESX1Q9UBX0 185 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 ANAPC1Q9H1A4 1944 aa23.01■■□□□ 1.27
SSNA1-202ENST00000459860 KRT5P13647 590 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 ACO1P21399 889 aaKnown RBP23■■□□□ 1.27
SSNA1-202ENST00000459860 PDE6CP51160 858 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 USP46P62068 366 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 FKBP15Q5T1M5 1219 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 ASTLQ6HA08 431 aaPredicted RBP23■■□□□ 1.27
SSNA1-202ENST00000459860 TANGO2Q6ICL3 276 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 CLEC20AQ6ZU45 233 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 TMEM150AQ86TG1 271 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 RBBP8NLQ8NC74 664 aaPredicted RBP23■■□□□ 1.27
SSNA1-202ENST00000459860 FBXO32Q969P5 355 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 DUSP16Q9BY84 665 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 PNPLA8Q9NP80 782 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 FBXL21Q9UKT6 434 aa23■■□□□ 1.27
SSNA1-202ENST00000459860 TADA3O75528 432 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 FCARP24071 287 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 PON1P27169 355 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 KRT31Q15323 416 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 GOLGA7BQ2TAP0 167 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 CWF19L1Q69YN2 538 aaKnown RBP22.99■■□□□ 1.27
SSNA1-202ENST00000459860 TXNDC8Q6A555 127 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 MON1AQ86VX9 555 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 ARID3BQ8IVW6 561 aaPredicted RBP22.99■■□□□ 1.27
SSNA1-202ENST00000459860 MAB21L3Q8N8X9 362 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 ZMIZ2Q8NF64 920 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 DEPDC1BQ8WUY9 529 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 OVCA2Q8WZ82 227 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 KREMEN1Q96MU8 473 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 VPS16Q9H269 839 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 FBXO44Q9H4M3 255 aa22.99■■□□□ 1.27
SSNA1-202ENST00000459860 HELZP42694 1942 aaKnown RBP22.98■■□□□ 1.27
SSNA1-202ENST00000459860 TRAV19A0A0A6YYK7 116 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 BECN2A8MW95 431 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 NARSO43776 548 aaKnown RBP22.98■■□□□ 1.27
SSNA1-202ENST00000459860 BEST1O76090 585 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 WEE1P30291 646 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 ZNF165P49910 485 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 CLCN5P51795 746 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 BCAT1P54687 386 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 TAF10Q12962 218 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 STILQ15468 1287 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 POTEHQ6S545 545 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 YAF2Q8IY57 180 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 CMTM8Q8IZV2 173 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 RPP25Q9BUL9 199 aaKnown RBP22.98■■□□□ 1.27
SSNA1-202ENST00000459860 SLC46A2Q9BY10 475 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 TSPAN16Q9UKR8 245 aa22.98■■□□□ 1.27
SSNA1-202ENST00000459860 ZFHX2Q9C0A1 2572 aaPredicted RBP22.97■■□□□ 1.27
SSNA1-202ENST00000459860 HEPACAM2A8MVW5 462 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 TNFRSF10BO14763 440 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 ABL1P00519 1130 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 CKMP06732 381 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 USP17L7P0C7H9 530 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 PFKLP17858 780 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 PSMC3P17980 439 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 VIPR2P41587 438 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 PFKPQ01813 784 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 ARHGAP44Q17R89 818 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 ANKRD52Q8NB46 1076 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 KIF9Q9HAQ2 790 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 SLC2A4RGQ9NR83 387 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 OBP2AQ9NY56 170 aa22.97■■□□□ 1.27
SSNA1-202ENST00000459860 CFHP08603 1231 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 RFX1P22670 979 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 USP8P40818 1118 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 NBL1P41271 181 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 COPB1P53618 953 aaKnown RBP22.96■■□□□ 1.27
SSNA1-202ENST00000459860 BST2Q10589 180 aaKnown RBP22.96■■□□□ 1.27
SSNA1-202ENST00000459860 NCAPHQ15003 741 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 SMYD5Q6GMV2 418 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 GJB7Q6PEY0 223 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 VITQ6UXI7 678 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 MFSD6LQ8IWD5 586 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 CELF5Q8N6W0 485 aaKnown RBP22.96■■□□□ 1.27
SSNA1-202ENST00000459860 SCAMP5Q8TAC9 235 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 FUCA2Q9BTY2 467 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 TRMT61BQ9BVS5 477 aaKnown RBP22.96■■□□□ 1.27
SSNA1-202ENST00000459860 LIMA1Q9UHB6 759 aaKnown RBP22.96■■□□□ 1.27
SSNA1-202ENST00000459860 NCANO14594 1321 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 CFAP54Q96N23 3096 aa22.96■■□□□ 1.27
SSNA1-202ENST00000459860 ZNF840PA6NDX5 716 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 O00370 1275 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 PI15O43692 258 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 PRAMEF12O95522 483 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 ZNF132P52740 706 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 TPM4P67936 248 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 GRM2Q14416 872 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 ZSCAN23Q3MJ62 389 aa22.95■■□□□ 1.26
SSNA1-202ENST00000459860 ASCL5Q7RTU5 278 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms