RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 FIBCD1Q8N539 461 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 TTC9BQ8N6N2 239 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 RAD9AQ99638 391 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 TRIM7Q9C029 511 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 ALG13Q9NP73 1137 aaKnown RBP10.89□□□□□ -0.67
USP39-210ENST00000459775 INSL6Q9Y581 213 aa10.89□□□□□ -0.67
USP39-210ENST00000459775 SF3B1O75533 1304 aaKnown RBP eCLIP10.89□□□□□ -0.673e-9■■■■■ 206.8
USP39-210ENST00000459775 FANCGO15287 622 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 SOAT2O75908 522 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 EFEMP2O95967 443 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 CCDC159P0C7I6 412 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 FGFR3P22607 806 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 LHX1P48742 406 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 VAV2P52735 878 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 TMED1Q13445 227 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 CNGA2Q16280 664 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 CTXN3Q4LDR2 81 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 SLC39A12Q504Y0 691 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 ACAD10Q6JQN1 1059 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 PMF1Q6P1K2 205 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 TAX1BP1Q86VP1 789 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 RIN2Q8WYP3 895 aaPredicted RBP10.88□□□□□ -0.67
USP39-210ENST00000459775 NDRG1Q92597 394 aaKnown RBP10.88□□□□□ -0.67
USP39-210ENST00000459775 CPXM1Q96SM3 734 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 ISCUQ9H1K1 167 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 ST7Q9NRC1 585 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 COG5Q9UP83 839 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 YBX2Q9Y2T7 364 aaKnown RBP10.88□□□□□ -0.67
USP39-210ENST00000459775 TRAPPC3O43617 180 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 OAZ2O95190 189 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 MOCS3O95396 460 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 ECEL1O95672 775 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 CA3P07451 260 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 H2AFZP0C0S5 128 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 RRM1P23921 792 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 GPD2P43304 727 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 KRT83P78385 493 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 PTPN20Q4JDL3 420 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
USP39-210ENST00000459775 SDHAF4Q5VUM1 108 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 LCLAT1Q6UWP7 414 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 H2AFVQ71UI9 128 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 CPNE8Q86YQ8 564 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 GIMAP1Q8WWP7 306 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 MYLPFQ96A32 169 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 PIWIL1Q96J94 861 aaKnown RBP10.88□□□□□ -0.67
USP39-210ENST00000459775 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 TNIP3Q96KP6 325 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 SLC9A7Q96T83 725 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 PBX4Q9BYU1 374 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 SPG21Q9NZD8 308 aa10.88□□□□□ -0.67
USP39-210ENST00000459775 LINC01553A4QN01 128 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 RTN2O75298 545 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 FGF18O76093 207 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 ERBB2P04626 1255 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 TYMPP19971 482 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CYP2F1P24903 491 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 NSFP46459 744 aaKnown RBP10.87□□□□□ -0.67
USP39-210ENST00000459775 MAP3K7CLP57077 242 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 PTP4A2Q12974 167 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 MRPL58Q14197 206 aaKnown RBP10.87□□□□□ -0.67
USP39-210ENST00000459775 ZNF677Q86XU0 584 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 VPS52Q8N1B4 723 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 MYCBPAPQ8TBZ2 947 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 GPR152Q8TDT2 470 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 TMEM169Q96HH4 297 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 ACBD6Q9BR61 282 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CRISPLD1Q9H336 500 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 KRT82Q9NSB4 513 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CUEDC1Q9NWM3 386 aaPredicted RBP10.87□□□□□ -0.67
USP39-210ENST00000459775 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 SLC27A5Q9Y2P5 690 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 REV3LO60673 3130 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 VNN2O95498 520 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 LAG3P18627 525 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 DNAJB1P25685 340 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CA8P35219 290 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 GPR15P49685 360 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CENPCQ03188 943 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 TAF5Q15542 800 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 ARHGAP29Q52LW3 1261 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 FAM171BQ6P995 826 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 MON1BQ7L1V2 547 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 GPRIN1Q7Z2K8 1008 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 RNF168Q8IYW5 571 aaPredicted RBP10.87□□□□□ -0.67
USP39-210ENST00000459775 MCOLN2Q8IZK6 566 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 THEM5Q8N1Q8 247 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 TMEM35BQ8NCS4 154 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CLEC4CQ8WTT0 213 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 ZNF653Q96CK0 615 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 MPP4Q96JB8 637 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms