RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 FAM86C1Q9NVL1 165 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 GTSE1Q9NYZ3 720 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 GMIPQ9P107 970 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 DACH1Q9UI36 760 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 COQ4Q9Y3A0 265 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 MTF2Q9Y483 593 aaPredicted RBP19.78■□□□□ 0.76
USP39-209ENST00000458268 PCDHB4Q9Y5E5 795 aa19.78■□□□□ 0.76
USP39-209ENST00000458268 FAM170BA6NMN3 283 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 H0Y858 1186 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 PES1O00541 588 aaKnown RBP19.77■□□□□ 0.76
USP39-209ENST00000458268 MBL2P11226 248 aaPredicted RBP19.77■□□□□ 0.76
USP39-209ENST00000458268 RAD23BP54727 409 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 STARD6P59095 220 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 FCHO2Q0JRZ9 810 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 PHLDB3Q6NSJ2 640 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 FOXR2Q6PJQ5 311 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 ZNF852Q6ZMS4 543 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 CLEC20AQ6ZU45 233 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 RRAGAQ7L523 313 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 GPRIN1Q7Z2K8 1008 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 TTC39CQ8N584 583 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 SH3RF2Q8TEC5 729 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 KAT5Q92993 513 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 CEP295NLQ96MC4 621 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 MED15Q96RN5 788 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 HNRNPABQ99729 332 aaKnown RBP19.77■□□□□ 0.76
USP39-209ENST00000458268 NACA2Q9H009 215 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 LTB4R2Q9NPC1 389 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 GKN1Q9NS71 199 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 OBP2AQ9NY56 170 aa19.77■□□□□ 0.76
USP39-209ENST00000458268 ZNF840PA6NDX5 716 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 ACO1P21399 889 aaKnown RBP19.76■□□□□ 0.75
USP39-209ENST00000458268 TBXAS1P24557 533 aaPredicted RBP19.76■□□□□ 0.75
USP39-209ENST00000458268 TARSP26639 723 aaKnown RBP19.76■□□□□ 0.75
USP39-209ENST00000458268 IFNAR2P48551 515 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 MCCD1P59942 119 aaPredicted RBP19.76■□□□□ 0.75
USP39-209ENST00000458268 GOLGA7BQ2TAP0 167 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 TMEM270Q6UE05 265 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 ARHGEF19Q8IW93 802 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 DTWD2Q8NBA8 298 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 PDZD8Q8NEN9 1154 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 RIN3Q8TB24 985 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 CRACR2AQ9BSW2 395 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 INTS2Q9H0H0 1204 aaKnown RBP19.76■□□□□ 0.75
USP39-209ENST00000458268 EBF3Q9H4W6 596 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 GCNT4Q9P109 453 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 MRPS17Q9Y2R5 130 aaKnown RBP19.76■□□□□ 0.75
USP39-209ENST00000458268 WNT6Q9Y6F9 365 aa19.76■□□□□ 0.75
USP39-209ENST00000458268 MUC6Q6W4X9 2439 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 GALR2O43603 387 aaPredicted RBP19.75■□□□□ 0.75
USP39-209ENST00000458268 CALCAP01258 141 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 PDE6CP51160 858 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 PTPN5P54829 565 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 MTF1Q14872 753 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 CCDC105Q8IYK2 499 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 EHBP1Q8NDI1 1231 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 FAM3CQ92520 227 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 CPQQ9Y646 472 aa19.75■□□□□ 0.75
USP39-209ENST00000458268 MAN2B1O00754 1011 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 TNFRSF10BO14763 440 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 CYP26A1O43174 497 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 IRF1P10914 325 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 ARSAP15289 507 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 WEE1P30291 646 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 MARSP56192 900 aaKnown RBP19.74■□□□□ 0.75
USP39-209ENST00000458268 PLCB2Q00722 1185 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 SGO2Q562F6 1265 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 ATOH1Q92858 354 aaPredicted RBP19.74■□□□□ 0.75
USP39-209ENST00000458268 PRRX2Q99811 253 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 DUSP16Q9BY84 665 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 RNF38Q9H0F5 515 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 CCSER2Q9H7U1 834 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 DUS2Q9NX74 493 aaKnown RBP19.74■□□□□ 0.75
USP39-209ENST00000458268 HESX1Q9UBX0 185 aa19.74■□□□□ 0.75
USP39-209ENST00000458268 P4HA2O15460 535 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 KRT5P13647 590 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 PRKCSHP14314 528 aaPredicted RBP19.73■□□□□ 0.75
USP39-209ENST00000458268 PPP3CCP48454 512 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 SLC8A3P57103 927 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 TCF15Q12870 199 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 USP4Q13107 963 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 ZNF268Q14587 947 aaPredicted RBP19.73■□□□□ 0.75
USP39-209ENST00000458268 ZNF77Q15935 545 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 ITPRIPL2Q3MIP1 535 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 HECTD3Q5T447 861 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 SASS6Q6UVJ0 657 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 FAM114A1Q8IWE2 563 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 FAXDC2Q96IV6 333 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 DDX23Q9BUQ8 820 aaKnown RBP19.73■□□□□ 0.75
USP39-209ENST00000458268 KCNH6Q9H252 994 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 FBXO44Q9H4M3 255 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 CSNK1G1Q9HCP0 422 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 SPATA6Q9NWH7 488 aaPredicted RBP19.73■□□□□ 0.75
USP39-209ENST00000458268 CFAP97Q9P2B7 532 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 TSPAN16Q9UKR8 245 aa19.73■□□□□ 0.75
USP39-209ENST00000458268 SOBPA7XYQ1 873 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 SPECC1L-ADORA2AF8WAN1 911 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 LEFTY2O00292 366 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 ARNTLO00327 626 aa19.72■□□□□ 0.75
USP39-209ENST00000458268 NCAM2O15394 837 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms