RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PFKLP17858 780 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 SLC5A3P53794 718 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 RAD23BP54727 409 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 ZNF268Q14587 947 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 DPCR1Q3MIW9 517 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 PPP1R26Q5T8A7 1209 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 SCAMP5Q8TAC9 235 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 GPT2Q8TD30 523 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 ZFYVE19Q96K21 471 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 CSNK1G1Q9HCP0 422 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 GKN1Q9NS71 199 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 CCL26Q9Y258 94 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 PCDHB4Q9Y5E5 795 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 PIAS3Q9Y6X2 628 aa19.13■□□□□ 0.65
PDLIM2-215ENST00000456545 NCANO14594 1321 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 ZNF840PA6NDX5 716 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 BEST1O76090 585 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 DCNP07585 359 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 ERCC5P28715 1186 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 SASS6Q6UVJ0 657 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 SLC4A11Q8NBS3 891 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 TTC8Q8TAM2 541 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 OVCA2Q8WZ82 227 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 LRRC3BQ96PB8 259 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 SLC22A12Q96S37 553 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 DUSP16Q9BY84 665 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 NACA2Q9H009 215 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 IRF2BPLQ9H1B7 796 aa19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 C8orf33Q9H7E9 229 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-215ENST00000456545 GLULP15104 373 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 ACO1P21399 889 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 PTPN5P54829 565 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 SGO2Q562F6 1265 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 CT47A1Q5JQC4 288 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 CLEC20AQ6ZU45 233 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 RRAGAQ7L523 313 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 ZMIZ2Q8NF64 920 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 PJA1Q8NG27 643 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 FAM3CQ92520 227 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 FAM122AQ96E09 287 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 THAP9Q9H5L6 903 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 GCNT4Q9P109 453 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 HESX1Q9UBX0 185 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 NDRG2Q9UN36 371 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 OBSL1O75147 1896 aa19.11■□□□□ 0.65
PDLIM2-215ENST00000456545 TNFRSF10BO14763 440 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 GALR2O43603 387 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 MBL2P11226 248 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 IFNAR2P48551 515 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 MTF1Q14872 753 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 ITPRIPL2Q3MIP1 535 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 HECTD3Q5T447 861 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 C1orf228Q6PIY5 440 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 TMEM270Q6UE05 265 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 DTWD2Q8NBA8 298 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 SH3RF2Q8TEC5 729 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 DDX23Q9BUQ8 820 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 INTS2Q9H0H0 1204 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 LTB4R2Q9NPC1 389 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 TLR8Q9NR97 1041 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 DUS2Q9NX74 493 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 GTSE1Q9NYZ3 720 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 KIAA1257Q9ULG3 409 aa19.1■□□□□ 0.65
PDLIM2-215ENST00000456545 PES1O00541 588 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 VDRP11473 427 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 AMPD2Q01433 879 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 PDGFRLQ15198 375 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 ARHGAP17Q68EM7 881 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 GBP6Q6ZN66 633 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 CCDC105Q8IYK2 499 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 PRSS33Q8NF86 280 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 MSANTD3Q96H12 275 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 MED15Q96RN5 788 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 OSBPL6Q9BZF3 934 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 RNF38Q9H0F5 515 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 PNPLA8Q9NP80 782 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 UBE2TQ9NPD8 197 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 IL37Q9NZH6 218 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 GMIPQ9P107 970 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 ARHGAP26Q9UNA1 814 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 MTF2Q9Y483 593 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 TICRRQ7Z2Z1 1910 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 ANAPC1Q9H1A4 1944 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 KMT2EQ8IZD2 1858 aa19.09■□□□□ 0.65
PDLIM2-215ENST00000456545 PRKCSHP14314 528 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 MLLT6P55198 1093 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 TNK2Q07912 1038 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 RUNX3Q13761 415 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 GOLGA7BQ2TAP0 167 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 HSP90AA4PQ58FG1 418 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 RALGPS2Q86X27 583 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 ANKRD52Q8NB46 1076 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 LMO3Q8TAP4 145 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 ATOH1Q92858 354 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 CRACR2AQ9BSW2 395 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 EBF3Q9H4W6 596 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 SMPD4Q9NXE4 827 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 CPQQ9Y646 472 aa19.08■□□□□ 0.64
PDLIM2-215ENST00000456545 SPECC1L-ADORA2AF8WAN1 911 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms