RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 PKD1L2Q7Z442 2459 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 SGK1O00141 431 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 KHNYNO15037 678 aaKnown RBP12.7□□□□□ -0.38
LMCD1-206ENST00000456506 CEACAM1P13688 526 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 SPINK2P20155 84 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 GBP1P32455 592 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 EIF2DP41214 584 aaKnown RBP12.7□□□□□ -0.38
LMCD1-206ENST00000456506 NR1H3Q13133 447 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 CUL4AQ13619 759 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 DHCR24Q15392 516 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 USP39Q53GS9 565 aaKnown RBP12.7□□□□□ -0.38
LMCD1-206ENST00000456506 SV2BQ7L1I2 683 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 TTC16Q8NEE8 873 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 HPS3Q969F9 1004 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 MRPL45Q9BRJ2 306 aaKnown RBP12.7□□□□□ -0.38
LMCD1-206ENST00000456506 TMEM9BQ9NQ34 198 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 TMEM74BQ9NUR3 256 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 EVLQ9UI08 416 aaPredicted RBP12.7□□□□□ -0.38
LMCD1-206ENST00000456506 ZMIZ1Q9ULJ6 1067 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 FREM2Q5SZK8 3169 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 DSPP15924 2871 aaKnown RBP12.7□□□□□ -0.38
LMCD1-206ENST00000456506 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
LMCD1-206ENST00000456506 F8VP50 259 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
LMCD1-206ENST00000456506 CST3P01034 146 aaPredicted RBP12.69□□□□□ -0.38
LMCD1-206ENST00000456506 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 PTGER3P43115 390 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 PDE6CP51160 858 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 CYP27A1Q02318 531 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 FOXC1Q12948 553 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 EMC10Q5UCC4 262 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 DAB2IPQ5VWQ8 1189 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 EPM2AIP1Q7L775 607 aaPredicted RBP12.69□□□□□ -0.38
LMCD1-206ENST00000456506 CYP2U1Q7Z449 544 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 ETFBKMTQ8IXQ9 262 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 CCDC26Q8TAB7 109 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 RLN3Q8WXF3 142 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 DPEP3Q9H4B8 488 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 TRPM5Q9NZQ8 1165 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
LMCD1-206ENST00000456506 CPQQ9Y646 472 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 GON4LQ3T8J9 2241 aa12.69□□□□□ -0.38
LMCD1-206ENST00000456506 TNFRSF10BO14763 440 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 KIAA0391O15091 583 aaKnown RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 TGFB1I1O43294 461 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 TACC1O75410 805 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 KAT7O95251 611 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 PDGFRBP09619 1106 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 IDEP14735 1019 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 GRIK1P39086 918 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 PPP3CCP48454 512 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 TAF10Q12962 218 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 MAPRE1Q15691 268 aaKnown RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 HSF5Q4G112 596 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 TXNDC5Q8NBS9 432 aaKnown RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 ANKRD36BP1Q96IX9 119 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 PNKPQ96T60 521 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 CD248Q9HCU0 757 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 HSPBP1Q9NZL4 362 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 ZFYVE26Q68DK2 2539 aa12.68□□□□□ -0.38
LMCD1-206ENST00000456506 MUC22E2RYF6 1773 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 NYNRINQ9P2P1 1898 aaKnown RBP12.68□□□□□ -0.38
LMCD1-206ENST00000456506 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
LMCD1-206ENST00000456506 ZNF233A6NK53 670 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 TRIM66O15016 1216 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 KLF8O95600 359 aaPredicted RBP12.67□□□□□ -0.38
LMCD1-206ENST00000456506 FAM163BP0C2L3 166 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
LMCD1-206ENST00000456506 TIE1P35590 1138 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 EHHADHQ08426 723 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 E2F4Q16254 413 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 SNX30Q5VWJ9 437 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 TMEFF1Q8IYR6 380 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 DEFB124Q8NES8 71 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 ZNF516Q92618 1163 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 PIGKQ92643 395 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 WBP2Q969T9 261 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 SCNM1Q9BWG6 230 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms